| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3702 |
|---|
| Symbol | |
|---|
| ID | 4481039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4655879 |
|---|
| End bp | 4656949 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639724458 |
|---|
| Product | rRNA (guanine-N(2)-)-methyltransferase |
|---|
| Protein accession | YP_867593 |
|---|
| Protein GI | 117926976 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCATG ATGCCCGTGC GATTCAACGT TTTTTCCAGA GCCTGCCCAG TGTGCTTGAG
GTAGCCACCA TCAGCCATCT CCATCTGGTG CATTGGCCCC TCAACCAGTG GCCGTTGGCG
CATACCCTGG CAGAAATGGG CTTTGCGGGT ACCCTAACCA CCGCCCGTAT CTCTACCCAG
GTTATGGCGC AAAAGGATGG CTTTAAACGG ATTCGCTGCC ACGATCACCC CAGCGGCGAA
GAGCCCGCCA GCCATATCTT AATGGAGCTG CCCCAGGGTA AGGAGGCCGC CAAATTGGCC
ATCGAAGAGG CCCTGGCCAG CCTACCGCCA GAGGGAAAAT TATGGCTGTT TGGGGATAAG
GAGAGCGGCA TTCAGCCCTT ACCCAAATAT TGGTCTAACG GCCATACCAT ACTCAACAAG
GGCCATTTAA AGCTGGTGCA GTTAAACAAA ACCAGCCAGT GGCAAGATCA ACCGAGCAAA
AAAAAGCCAA TCCTGCCTAC ACGGGTCGAA GGGGAGCCCT TTTACCACTA CCAAAATGGT
GACGTGACCC TGGCGACCCT TCCGGGTCTC TTCTCCTGGG CAGAACCGGA TGCTGCTTCG
TTAATGCTGT TGCAGGCTTT GCAGCATCAA CGTATGTACC ATCTATTGGA TTGGGGTTGT
GGATGCGGCC TGATTGGCAC CACTTTGGCC AAACACCACC CCACCCTCCA AGTTACCCTC
TCCGATGATA TGGTGCGCGC CACCCGTTGT AGTACCGAGA GTGTGCGCTT AAACCAGCTA
CAGGCCCGCT GTCAGGTGAT CCTGGAGGAT GGCATCGGCC CCCATCTGCG TAACCAGGGC
TTTGATACCA TTGTCACCAA CCCACCCTTC CACCGGGGAC AGTCGCTTAA TCGTGAAGTG
GCTCTGGAAT TTATCGGCGA CGCCGTTAAG ATATTGGAAA GGGGGGGGGC TTTATGGCTG
GTGGCCAACA GTTTTCTGGA CTACGGCCCC ATTTTACAAG CCTCCTTCAA AAAGGTGGAG
ACGGTGCTAC GGGATAGCCG CTTTATTGTG TGGAAAGCCA TCAAAGGGTA A
|
|---|
| Protein sequence | MHHDARAIQR FFQSLPSVLE VATISHLHLV HWPLNQWPLA HTLAEMGFAG TLTTARISTQ
VMAQKDGFKR IRCHDHPSGE EPASHILMEL PQGKEAAKLA IEEALASLPP EGKLWLFGDK
ESGIQPLPKY WSNGHTILNK GHLKLVQLNK TSQWQDQPSK KKPILPTRVE GEPFYHYQNG
DVTLATLPGL FSWAEPDAAS LMLLQALQHQ RMYHLLDWGC GCGLIGTTLA KHHPTLQVTL
SDDMVRATRC STESVRLNQL QARCQVILED GIGPHLRNQG FDTIVTNPPF HRGQSLNREV
ALEFIGDAVK ILERGGALWL VANSFLDYGP ILQASFKKVE TVLRDSRFIV WKAIKG
|
|---|
| |