Gene Mmc1_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3700 
Symbol 
ID4481037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4655007 
End bp4655327 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content50% 
IMG OID639724456 
Producthypothetical protein 
Protein accessionYP_867591 
Protein GI117926974 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACTTG CGGGTTTTCA GCGCACATAC TTAAAGGGTC TTGCACACCC GCTCAAACCG 
GTGGTGTTTG TGGGTAAGGA GGGGGTTAAA GATTCCGTCT TAGCCGCAGT GGAAGAGGCC
CTGCTCATTC ACGAATTGAT CAAAGTGCGC TTTTTGGATT TTAAAGAACA GCGTAAAGAT
CTGGCCAAAG CTTTGGCAAC CGATAGCCAG AGCGAGCTGG TGGGTATGAT TGGTCATCTG
GCCATTTTAT ACCGCGCTCA CCCCGAGCCA GAACACCGTC GCATTCAACT GCCCAAGAAA
AAGCCAAAGA AGAGTGAATG A
 
Protein sequence
MSLAGFQRTY LKGLAHPLKP VVFVGKEGVK DSVLAAVEEA LLIHELIKVR FLDFKEQRKD 
LAKALATDSQ SELVGMIGHL AILYRAHPEP EHRRIQLPKK KPKKSE