| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3690 |
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| Symbol | metH |
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| ID | 4480970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4629923 |
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| End bp | 4633585 |
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| Gene Length | 3663 bp |
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| Protein Length | 1220 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639724446 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_867581 |
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| Protein GI | 117926964 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA TGGCAAACCA ACGTACCGAG CAGTTTCGCA CCCTTCTTCA ACAGCGCATT
CTCATCCTCG ATGGGGCAAT GGGCACCATG ATTCAGCGGC TGGGATTGGA GGAGGCGGAC
TACCGTGGCA GCCGTTTTGC CGATCATCCC GCCGAACTGC ATGGTGCCAA TGATCTGTTG
GTTTTGACCA AGCCCCAGGT GATACGCAAT ATCCACACCG CTTATCTAGA AGCCGGCGCC
GATATTGTAG AGACCAATAC CTTTAATGGC AATGCGCCCT CCCTGGGGGA TTATGGCCTT
GAGGCGTTGG TTTATGAGGT CAATCTGGAA GGGGCCAGAG TTGCCCGCCA AGCGTGTGAT
GCGGTGATGG CCCAGCAGCC GGGGCGTATC TGCTTTGTGG CGGGGGTGTT GGGCCCTACC
AACCGCACCT GTAGCATCTC GCCGGATGTG AACAATCCTG GTTTTCGCAA TATTGATTTT
GACGCCCTGG TTGCGGATTA CGCCAATGGC ACCCGTGGTC TGTTGGATGG AGGGGCCGAT
ATTCTGTTGG TGGAGACGGT CTTTGATACC CTCAACTGCA AGGCGGCCCT GTTTGCGGTG
CGTCAGGTAT TGGAGCAGCG CCAGCTGGAT CTACCCTTGA TGATCTCCTT TACCATTACC
GATCAATCTG GGCGTACCCT CACCGGCCAA ACGGTGGAGG CCTTCTGGAA TTCGGTGAGC
CATGCCCGTC CTGATACCAT CGGCATGAAC TGCGCGTTGG GGGCCGATCA GCTGCGTCCC
CATCTGGAAA CCCTGGCGGA GATCGCCGCA ACCCGCATCT CGGTACACCC CAATGCGGGT
CTACCCAACG CCTTTGGTGA GTATGATGAA ACCCCGGCGA TGATGGCCGA TAAGGTGGTG
GCTTTTGCCC AAGGGGGGTT GATTAACATT GTGGGGGGGT GTTGTGGCAC CTCGCCGGAC
CATATCCGGG CCATTGCACA GCGGGTTGCA GGGCTGGCCC CCCGGCAGAT CCCGACCCTC
AAGCCGGCCT GTCACCTGAG CGGCTTGGAG CCGCTGACCA TAGATGCCGA CAGCCTGTTT
GTGAACGTGG GGGAGCGCAC CAACGTGGCA GGCAGTGCCC GTTTTGCCCG CTTGATCCGT
GAGGGCCAGT ATGAGACCGC CTTGGCGGTG GCTCGGGAGC AGGTGGAGAG CGGTGCGCAA
ATCGTGGATG TCAACATGGA TGACGCCATG TTGGATGCCC AGTCGGCCAT GGTGACATTT
TTAAACCTGA TGGCCGCCGA GCCGGAGATC AGCCGGGTGC CGGTGATGAT TGACTCCTCC
GAGTGGCGGG TGTTGGAGGC TGGTCTAAAG TGTGTGCAGG GCAAGTGCAT CATTAACTCC
CTCAGTCTCA AGGAGGGGGA TGAGCCCTTT CTCAAGCAGG CCCATTTGGC GCGTCGTTAT
GGTGCGGCGG TAATTGTGAT GGCCTTTGAT GAGCAGGGGC AGGCCGACAG TTACCAGCGG
CGTATTGATA TCTGCCAAAG GGCCTATGAC CTGTTGGTGC ATACGGTGGG CATGGAGCCC
AATGATATTA TCTTTGATCC CAACATATTT GCGGTGGCTA CTGGCATAGA GGAGCACAAC
AACTATGCGG TGGAGTTTAT TCAGGCCACC CGCTGGATCA AACAGAACCT GCCGGGTGCC
CGCATCAGTG GTGGGGTGAG CAATGTTTCC TTCTCGTTTA GGGGCAACAA TCCAGTGCGG
GAGGCGATGC ATGCGGTATT TCTCTATCAC GCCATCGCGG CGGGCATGGA TATGGGCATT
GTCAATGCCG GGCAGTTGGC GGTGTATGAG GAGATCCCGG TTGATCTAAG GGAGCGGGTG
GAGGATGTCA TCCTCAACCG CCGCAGTGAT GCCACCGACC GTCTGTTGGA GGTGGCCGAT
CACTATCGGC AGAGCGGCGT AACCGAGGAT AAAGCGGATG CCGCATGGCG CAGTGAGCCG
GTGCAAGCGC GTCTACGGCA CGCCATGATC AAGGGCATTA CCGAATTTAT TGACGCCGAT
GTGGAGGAGG CCCGCAGCCT AGCGGCGCAT CCGTTGGAGG TGGTGGAAGG GCCACTGATG
GCGGGTATGA ATGCGGTGGG GGATCTGTTT GGCGAGGGCA AGATGTTTTT GCCCCAGGTG
GTGAAGAGCG CCCGGGTGAT GAAACAGGCG GTGGCCTATC TGGTACCCCA TATTGAGGAG
GCCAACCGCC AGGGTGGTAT AGAGAACCGT GCCAGTGGCG CGGGCAAGAT TTTGTTGGCG
ACGGTTAAGG GAGATGTCCA CGACATTGGC AAAAACATTG TTAAGGTCGT ATTGCAGTGC
AACAATTTTG AGGTGGAAGA TCTGGGCGTG ATGGTGGCGG TGGAGACCAT TTTGGATCGC
GCTCAGGAGA GCGGCGCGCA GATTATTGGT CTCTCGGGGC TGATTACCCC CTCTTTGCAG
CAGATGACCC ATGTGGCCAA GGAGATGCAG CGCCGTGGCA TGCAGCATAT TCCCCTGTTG
ATTGGGGGGG CGACGACCTC TAAGGCGCAC ACGGCGGTTA AGATTGCCCC GGTTACCGAG
GGGTGTGTGG TGCAGGTGAA GGACGCCTCC CGTTCGGTGG GGGTGGCGGC GGCGCTGCTG
AGTGCGCGGG AGCGGGATGA TTTTATGGCC GCGTGTGTGG CTGAGCATGA AAAATATCGC
GCCATTCATG AGCAGCGTAG CACCCGCAAG CCGCTTTTGA GTATGCAGGA GGCACGGGCA
CGGGCCTTTG CAACCCCGGC TGCCGTAACC CAAGCGGCGC AGCCCGGTGT GCATGTGCTG
GCGGATTATG ATTTGGCCAC TTTGGTGCCC TATATTGACT GGACCCCCTT TTTCCGCACC
TGGGAGCTGC ATGGTCGTTA TCCAGAGATC CTGTCGGATA GCAAGGTTGG GCAGGCCGCC
ACGCGGCTGT TTGAGGATGC CCAGCAGATG CTGCAAGAGA TCATCGCTCA GGGTAGCCTT
AAGGCCAATG GGGTGTTGGG GCTCTTTAAC GCCTCCCGCG TGGGGGATGA TATTGAACTG
GCCGACGGTT TAGGCACCAT CCACACCCTG CGTCAGCAGC GGGACGGTGG GGAGGCCCCC
TGTTATGCCC TGGCGGATTT TGTGGGGCAG GGGGATACCA TCGGTATGTT TGCGGTCACA
GCGGGCATTG GTGTGGCGGA GTTGGTGGCG CATCATCAAG CGGCCCATGA TGACTATCGG
GCGATTATGG TAGAGGCGCT GGCCGACCGC TTGGCCGAGG CTTTTGCAGA GCACATTCAT
GAACGGGCCC GCCGGGAGTT TTGGGGGTAT GCCGGGGATG AGGCGCTCTC TAAGGGTGAC
TTAATTGCGG AGCGCTATGT GGGCATTCGT CCGGCACCGG GCTATCCGGC CTGTCCGGAC
CATACGGAAA AAGCGCTGCT GTTTAAATGT CTGAATGCGC AGGAGCATGC GGGTATGGCG
TTGACGGAGA GCTTTGCCAT GACCCCAGCG GCATCGGTGA GTGGTTATCT GTTTGCCCAT
CCACAGGCAC GCTATTTTTC GGTTGGCCGC ATAGGTGGCG ATCAGTTGGA GGCGTACGCC
AAACGCAAGG GCATGTCTGT GGAAGAGATG GCCAAATGGT TGGCCCCCAA TTTAGATAGT
TAG
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| Protein sequence | MSAMANQRTE QFRTLLQQRI LILDGAMGTM IQRLGLEEAD YRGSRFADHP AELHGANDLL
VLTKPQVIRN IHTAYLEAGA DIVETNTFNG NAPSLGDYGL EALVYEVNLE GARVARQACD
AVMAQQPGRI CFVAGVLGPT NRTCSISPDV NNPGFRNIDF DALVADYANG TRGLLDGGAD
ILLVETVFDT LNCKAALFAV RQVLEQRQLD LPLMISFTIT DQSGRTLTGQ TVEAFWNSVS
HARPDTIGMN CALGADQLRP HLETLAEIAA TRISVHPNAG LPNAFGEYDE TPAMMADKVV
AFAQGGLINI VGGCCGTSPD HIRAIAQRVA GLAPRQIPTL KPACHLSGLE PLTIDADSLF
VNVGERTNVA GSARFARLIR EGQYETALAV AREQVESGAQ IVDVNMDDAM LDAQSAMVTF
LNLMAAEPEI SRVPVMIDSS EWRVLEAGLK CVQGKCIINS LSLKEGDEPF LKQAHLARRY
GAAVIVMAFD EQGQADSYQR RIDICQRAYD LLVHTVGMEP NDIIFDPNIF AVATGIEEHN
NYAVEFIQAT RWIKQNLPGA RISGGVSNVS FSFRGNNPVR EAMHAVFLYH AIAAGMDMGI
VNAGQLAVYE EIPVDLRERV EDVILNRRSD ATDRLLEVAD HYRQSGVTED KADAAWRSEP
VQARLRHAMI KGITEFIDAD VEEARSLAAH PLEVVEGPLM AGMNAVGDLF GEGKMFLPQV
VKSARVMKQA VAYLVPHIEE ANRQGGIENR ASGAGKILLA TVKGDVHDIG KNIVKVVLQC
NNFEVEDLGV MVAVETILDR AQESGAQIIG LSGLITPSLQ QMTHVAKEMQ RRGMQHIPLL
IGGATTSKAH TAVKIAPVTE GCVVQVKDAS RSVGVAAALL SARERDDFMA ACVAEHEKYR
AIHEQRSTRK PLLSMQEARA RAFATPAAVT QAAQPGVHVL ADYDLATLVP YIDWTPFFRT
WELHGRYPEI LSDSKVGQAA TRLFEDAQQM LQEIIAQGSL KANGVLGLFN ASRVGDDIEL
ADGLGTIHTL RQQRDGGEAP CYALADFVGQ GDTIGMFAVT AGIGVAELVA HHQAAHDDYR
AIMVEALADR LAEAFAEHIH ERARREFWGY AGDEALSKGD LIAERYVGIR PAPGYPACPD
HTEKALLFKC LNAQEHAGMA LTESFAMTPA ASVSGYLFAH PQARYFSVGR IGGDQLEAYA
KRKGMSVEEM AKWLAPNLDS
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