| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3689 |
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| Symbol | |
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| ID | 4480969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4627604 |
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| End bp | 4629910 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639724445 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_867580 |
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| Protein GI | 117926963 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAT CCCGTGCCGC AGAGCTGCGT AAGCGGCTCA ACCACTATGC CCATAGCTAC
CATACCCTTG ATACGTCACT GGTATCCGAT GCCGAGTATG ACCGCCTGTT TAGAGAGCTG
CAAAGCTTAG AGGCGGCGGA TCCCACCTTG ATCAGCGCCG ACTCGCCAAC CCACCGGGTC
GGGGGTGCCA TCCTGGAGGG TTTTGAGAAG GTACGCCATC GGGTTGCCAT GCTCTCCCTG
GATAACGCCT TTTCTGCGCA GGATTTGGTG GAGTTCCACC GCCGCGTGCA GGAGGGCTTG
GCGGAGTCGG TGGTGGTGGA AGCCGTGCAG CACTATCAGG ATGAATATGG CCTGAGCGAT
TTAGGGGCGC TGGTGGGGCG ACCGGGGGCT TTGGAGGGGG TGGCCCGCGA TGTGACCCAG
CGGCTCAACC AGACCTTGAG TTTTGTGGAG CCCTTGCAGC CACCGGACAC TAAGAGCTTG
CTGAGCAGTG GCCGCAAAGC GGCGGATATT CTACGTCGTC TGCGTTTGTG GGCGGCGGAA
CAGCCCCAGC GGGTGGAGTA TGTGGCCGAA CCCAAGTTGG ATGGGCTGGC TTTTAGTCTG
ACCTATGCAG AGGGTGTGTT GGTGCGGGCG GCCACCCGTG GTGATGGGCA GGAGGGCGAG
GATGTTACCG CCCATGCGCG CACCATACAG GATGTTCCCC TAAGATTGCA GGGGGCGGGC
TATCCGGCGC TATTGGAGGT GCGGGGCGAG GTCTATATGC CCTTGGCAAC CTTTGAAAAA
CTTAATGCCG AGGCGCGGGA AAGGGGAGAA AAAACCTTTG CCAATCCACG CAATGCGGCG
GCGGGCAGTC TGCGCCAGTT GGACCCCAAG ATAACCGCCA GCCGGGGTTT GCGGATGTTT
TGTTATGGCA CGGGTTATGT GGAGGGGGGC ACGCTGGCGG ACCGTTATGC GGAGATTTTA
GCGGCGCTGA AGGGGTGGGG TTTGCGGGTG TCGCCAGAGG CCGAGCGGGT GGAGGGTGCC
CAAGGGTGTC TGGCGTATAC CGAGCGTTTG GGTGAAAAAC GTGAAACCTT ACCCTATGAA
ATTGACGGAG CGGTGTTGAA GGTGGATAGC CAGCGGTTGC GGGAGCGGCT GGGTTTTGTG
GCGCGGGCAC CGCGCTGGGC CATGGCCTTT AAGTTTCCGG CCACGGAGGA GAGCACCACG
GTACAGGCCA TTGATCTACA GGTTGGGCGA ACCGGGGTTA TTACGCCGGT GGCGCGGTTG
GAGCCTGTGG CGGTGGGGGG GGTGACCGTG ACCAATGCCA CACTGCACAA TTTTTTGGAG
TTGGCCCGTA AGGATGTACG GGTTGGGGAT CGGGTCATTG TGCGCCGCGC CGGGGATGTG
ATCCCAGAGG TGGTGCGGGT GATCCCCCGT GAGAGCCATG GGGCCCTTGC GGTATATAAA
GAGCCGGTGG CCTGTCCGGT GTGTGGTGCG CCGACGGAGC GTGAGGGGGG GGAGACGGCC
CTGCGCTGTT CGGGTGGTTT GACCTGTCGG GCGCAGGTTA AGGAGGGGGT TAAGCACTTT
GCCTCACGCA AGGCGATGAA CATTGAGGGC TTGGGCGATA AGTTGGTGGC GTTGCTGATG
CAAGCGGGTT TGGTTGAGCG GATTTCGGAT CTCTACCGGC TGCATGAGCA GCGGCAGGTC
TTGGTGGGGT TGGAGCGGCT CGGTGGTAAG TCGGTGGCCA ATTTATTGGA GGCCATTGAG
CAGAGCAAGG CACAGTCAGC GGCTCGATTT TTGTTTGGTT TGGGCATTCG GGATGTGGGG
GTTACGCTGG CGGGCTCCTT GGCGGCGCAT TTTACCAGTT TGGATGCGTT GATGGCAGCC
ACGGTAGAGG ATTTGGTCGG CATTGAGGAT GTGGGCGAGG TGGTGGCGCG GCGGGTGGTG
CATTTTTTTG CCCAAGCGCA CCATGGTGCG GAGTTAGCGG CATTGCGGGC GTTGGGGGTG
GCGGCGGCGG GTGAGCCATG GCGGGTTGAG CCGGATGGGC ATGGGGTAGC AGCGGCGGAG
CAGCCCTTAT CGGGTCTGTC GGTGGTTTTG ACGGGCACCC TGGCGGGCCT GACCCGTGAG
GCGGCGGCGG TTCGGTTAGA GGGGCTAGGG GCCAAGGTTG TGGCTTCGGT TTCTGGCAAG
ACGGGTTGTT TGGTGTGTGG GGAGAGTGCG GGATCCAAGC TGGCCAAAGC GCAGAAGGCG
GGGGTGCCGG TGTTGGATGA GGCCGCTTTA GAGGGGCTAT TTAGGGGCGA GATACCCCCT
GAGATTCAGG CCCGTATGCA GGGGTGA
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| Protein sequence | MSASRAAELR KRLNHYAHSY HTLDTSLVSD AEYDRLFREL QSLEAADPTL ISADSPTHRV
GGAILEGFEK VRHRVAMLSL DNAFSAQDLV EFHRRVQEGL AESVVVEAVQ HYQDEYGLSD
LGALVGRPGA LEGVARDVTQ RLNQTLSFVE PLQPPDTKSL LSSGRKAADI LRRLRLWAAE
QPQRVEYVAE PKLDGLAFSL TYAEGVLVRA ATRGDGQEGE DVTAHARTIQ DVPLRLQGAG
YPALLEVRGE VYMPLATFEK LNAEARERGE KTFANPRNAA AGSLRQLDPK ITASRGLRMF
CYGTGYVEGG TLADRYAEIL AALKGWGLRV SPEAERVEGA QGCLAYTERL GEKRETLPYE
IDGAVLKVDS QRLRERLGFV ARAPRWAMAF KFPATEESTT VQAIDLQVGR TGVITPVARL
EPVAVGGVTV TNATLHNFLE LARKDVRVGD RVIVRRAGDV IPEVVRVIPR ESHGALAVYK
EPVACPVCGA PTEREGGETA LRCSGGLTCR AQVKEGVKHF ASRKAMNIEG LGDKLVALLM
QAGLVERISD LYRLHEQRQV LVGLERLGGK SVANLLEAIE QSKAQSAARF LFGLGIRDVG
VTLAGSLAAH FTSLDALMAA TVEDLVGIED VGEVVARRVV HFFAQAHHGA ELAALRALGV
AAAGEPWRVE PDGHGVAAAE QPLSGLSVVL TGTLAGLTRE AAAVRLEGLG AKVVASVSGK
TGCLVCGESA GSKLAKAQKA GVPVLDEAAL EGLFRGEIPP EIQARMQG
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