| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3672 |
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| Symbol | |
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| ID | 4481482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4610445 |
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| End bp | 4611959 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724428 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_867563 |
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| Protein GI | 117926946 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0002131 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGG AGGCCGAACA GACCATTTTG GTCGCGGATG ATGATCAAGC CGTGCGCTTT
GTGCTGGAAC AGGCGTTGAG CCGGGCCGGC TACAAGGTAC ACGCTTTTGG CAATACCCAA
CCCTTGGTCA ACCATTTTAA CCAATATGGG GGGGATCTTA TCATCACCGA TGTGGTGATG
CCCGGCGGCT CGGGACTGGA TATGGTGCAA AGCTTAAAAG CCACTTATCC TGACCTGCCC
ATTATTGTGA TGACGGCCCA ATCCACTCTC CGCAATGCGG TACAAGCCTT TGAGCGGGGG
GCTTTTGAGT ATCTGGCCAA GCCCTTTGAC ATCAATCGGC TGGTGGATTT AACCCGACGT
GCCCTGCAAA AACAGGAAGA ACGCGTCCGC AATCAACCCC AAACCAAAAC CAAACAGCAG
GCCGCCGCCG AGGATATGGA TCGCCAGTTG GAGGAGCGCT TTGGCGGTAT CATTGGTTCA
TCCCGGGCGA TGCAGGCGCT GTTTCACACC ATTGGCCGTC TTTCGAATTC GGAGATGACG
GTGCTCATTC ATGGTGAATC GGGCACCGGT AAAGAGCTGG TAGCCCGTGC CGTGCATGCC
TACAGCCCCC GCCGCCGTGG CCCTTTTACT GCCATTAACA TGGCCGCTAT CCCCCGGGAT
TTGATTGAGT CGGAACTGTT TGGTCACGAA AAGGGGGCCT TTACCGGTGC GGTCTCCCGT
CGTCCTGGAC ATTTTCAAAA GGCCGAGGGC GGTACCCTGT TTCTGGATGA GATTGGGGAT
ATGCCCATGG AGGCCCAAAC CCGGCTGTTG CGGGTTCTGC AAGAGGGCAC CTTTACCTTG
GTGGGCAGCA CCGACATTTT GCGCAGTGAT GTCCGTATTA TTGCCGCCAC CCATCAGGAT
CTGCCCACCG CCATTTCCGA AGGTCGCTTT CGCGAGGATC TTTTCTACCG GCTTAATGTG
ATCCCCCTGC ATGTGCCCAC CCTGCGTTCC CGTAAAGAGG ATATTCCGGT TCTTTCGCAA
TATTTTTTGG CGAAAACCTC GAAAGAGCTG AAGGTTGCCA CCAAACGCCT CACCCAATCT
GCCATGGAAA AGTTGGTGGC CTATGACTGG CCCGGCAACG TCCGGGAGCT GGAAAACCTG
ATTCGCCGCC TTACGGTGTT GATTCCAGAG GATGAGATTC GCCCTGAAAA GATCGAACTC
TATGAGCGCA CCATGCCCAA GTTGGCCAGA AATGATCTAT CTGGCCATGA ACCCCAAGAG
GAGCGCTCCA CCGAGAGCAA CACCAGCCAT AGCTACGAAG CGATTTTATT ACAGGATCTG
GATACATTCT TTGCCACCAT GGGAGGATTG GAGACCAGCG GTGTGTATGA TATGGTTTTA
CGCAAGATGG AGGCGGTATT GATCCCCCGG GTGTTGCGGC AAACCCGTGG CAACCGGGTC
AAGGCGGCGC AAATTCTAGG CATAAACCGT AACACCTTAC GAAAAAAAAT GCGGGATTTG
GGGATGGATG ATTAA
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| Protein sequence | MQQEAEQTIL VADDDQAVRF VLEQALSRAG YKVHAFGNTQ PLVNHFNQYG GDLIITDVVM
PGGSGLDMVQ SLKATYPDLP IIVMTAQSTL RNAVQAFERG AFEYLAKPFD INRLVDLTRR
ALQKQEERVR NQPQTKTKQQ AAAEDMDRQL EERFGGIIGS SRAMQALFHT IGRLSNSEMT
VLIHGESGTG KELVARAVHA YSPRRRGPFT AINMAAIPRD LIESELFGHE KGAFTGAVSR
RPGHFQKAEG GTLFLDEIGD MPMEAQTRLL RVLQEGTFTL VGSTDILRSD VRIIAATHQD
LPTAISEGRF REDLFYRLNV IPLHVPTLRS RKEDIPVLSQ YFLAKTSKEL KVATKRLTQS
AMEKLVAYDW PGNVRELENL IRRLTVLIPE DEIRPEKIEL YERTMPKLAR NDLSGHEPQE
ERSTESNTSH SYEAILLQDL DTFFATMGGL ETSGVYDMVL RKMEAVLIPR VLRQTRGNRV
KAAQILGINR NTLRKKMRDL GMDD
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