| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3670 |
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| Symbol | |
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| ID | 4481480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4608312 |
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| End bp | 4609322 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639724426 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_867561 |
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| Protein GI | 117926944 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAT ACGATCCAAT TGAGAAGCTT TTTGCACAAA ACCTAGCCGG TGGTCCACCA
CCGCTGGTAC TTGCACCCAT GGCTGGGGTA ACCGATGCCC CTTTTCGACT TATCGCTCGG
CGCTACGGTG CTGACCTTAC GGTTTCGGAG ATGATCGCCT CCCAAGCCAT GATACGTAAC
ACCAGCAAAA GTCTACTCAT TGGTACCGCC CATGAGGAAG AACATCCCCT CTCGGTACAG
ATTGCCGGCA GCGATCCCCA AGTGATGGCC GAAGCAGCCC GCATGAATGT AGACCGGGGG
GCTGAAATAA TCGACATCAA TATGGGCTGC CCCGTTAAAA AAGTGGTTAA AGGGCAGGCG
GGTGCCGCTT TAATGCGCGA TGAGGCTCTG GTCGCACGAA TTTTAGCCGC TGTGGTGGCC
GCCGTTCCGG TGCCGGTCAC TCTTAAAATC CGCCTGGGGT GGGATAAAAG CAACCTAAAT
GGTGCCCGCA TCGGCCAAAT TGCCGAACAA CAGGGGGTTC GCATGCTCAC CGTGCATGGC
CGCACCCGCA TGCAGATGTA TCGCGGCCAT GCGGATTGGC AATGCATCGC CAGCATTAAA
CAGGCCGTCA CCATACCGGT GGTGGGCAAT GGGGATCTTC ACACCCCCCA AGAGGCTAAG
GAGAAGTGGC TGCTCTCTGG CGTTGATGGG TTGATGATTG GACGGGCCGC CATGGGCTGC
CCTTGGTTGT TTGGACAGAT TGCCCACTAT CTGCGCAGTG GTCAGGAAAA ACCACCTCCC
GATCTGGCCG AACAACACGC CTTGGTTTTG GAACATTTTG ATCGACTCAT TGATTTTTAT
GGGCCGCATA TCGGTAATCG CATGGCGCGC AAGCATCTGG CTTGGTACGC CAAAGGACTA
CCCAACAGCG CCCACTATCG CAGTGCGATC AACCATTGCC CTACGCCTGA AGAGACCCGC
CATCTGGTGG ACGACTTCTA CCGTGGTGTG CATAACACCC AAGCTGCGTA A
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| Protein sequence | MDTYDPIEKL FAQNLAGGPP PLVLAPMAGV TDAPFRLIAR RYGADLTVSE MIASQAMIRN
TSKSLLIGTA HEEEHPLSVQ IAGSDPQVMA EAARMNVDRG AEIIDINMGC PVKKVVKGQA
GAALMRDEAL VARILAAVVA AVPVPVTLKI RLGWDKSNLN GARIGQIAEQ QGVRMLTVHG
RTRMQMYRGH ADWQCIASIK QAVTIPVVGN GDLHTPQEAK EKWLLSGVDG LMIGRAAMGC
PWLFGQIAHY LRSGQEKPPP DLAEQHALVL EHFDRLIDFY GPHIGNRMAR KHLAWYAKGL
PNSAHYRSAI NHCPTPEETR HLVDDFYRGV HNTQAA
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