| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3668 |
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| Symbol | |
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| ID | 4481478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4605863 |
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| End bp | 4607221 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639724424 |
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| Product | sun protein |
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| Protein accession | YP_867559 |
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| Protein GI | 117926942 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAT CCCATGTTTC AGAACGCACC ATGGCCGCTG CGGCGGTCTC TGCCATGCTC
TCTGAGCACC TCCCCTTGGA AACCGCTTTG GAGCAGCAGA TTCACCAGCA GAGCGGTACT
TCGCCAGAGA TGCGTGGGCG GGCCCATGAG ATTGTGGTGG GTACCATCCG CCATATGGCG
TTGCTGGAGG CAACCCTGAC CCGTTTTATG CAAAAGGATC TCAAGGCCAA ACACCACTAT
GTACGGGCGG TGTTGCTGAC GGCTTTGTAT CAAGCGCAAT TTATGCGCAC CCCCATTCAT
TCGGCGGTGG ATGAGGCGGT TAAGTTGGTC AAACAACAGC CCCGTGACCA CAATCTTTCT
GGGTTTGTGA ATGCGGTGCT GCGGCGCTCC ACCGAGGTTG AACTCTCCAC CACGTGGTCG
GCGGTTAAAG ATCCCCTTAA GCGTTTGGCC ACGCGCTACT CTCACCCCCT TTGGCTGGTT
AAGCGTTGGG AAAAACGGTT GGGTATGGAG GCCACCGAGG CCCGTCTGGC GGCGGCCAAT
GCGCAGGCCC CCTTAACCTT GCGTATTCAC ACCCCCAAGG TCACGGTCGC GGACTATCTG
GCGGCGGCCA AACAGGCGGA GATTGAGGTA ACGGTCTGCC CCGAGGCTGA AGAGACGCTG
ATGCTGCCCC AAGGGGCCAA GGTGGCGACG CTGCCCGGTT ACAGCAACGG GTGGTTTGCG
GTGCAGGATC GTGCAGCGCA GGCGGTGGCG CGTCTGCTGG CCCCCCAGGC GGGGGAGGCT
ATTCTGGATG CCTGTGCGGC ACCTGGGGGA AAATCGGCGC ATTTGGTGGC GTTGGGGGGT
GCAGGGGTAG TGATTACCGC CCTGGATAGC GCCCAGCAGC GGCTGGAGCG CATGGGGGAA
AATATGGCGC GTCTGGGCAT TCGTTCACAG GTTAAGCTGC GCTGTGCCGA TGCCACACAG
CCCATCGAGG GTCTGTTTGA CCGTGCGCTG GTGGATGCCC CCTGTACCGG GACGGGGGTG
ATCCGGCGGC ATCCTGATAT TAAATGGCGG CGCAACCCCA GCGGTTTGGC GGAGGTGGTC
AAGCAGCAGC AGCAGATTTT GCAGTCGGTG GCCGCTGCGG TTAAGCCCGG CGGCTTGCTG
GTCTACGCCA CCTGCTCTTT AGAACCCGAT GAGAATGAGC AACAAGTGGC GCGATTCCTG
AAAGAGCATC CCCAGTGGAA GCGTCTGCCG TTGGAGGCGG GCATGGCGGG TATTCTCCCC
GAGTGGATTG ATTCCGCAGG GGATCTACGC ACCGAACCGG CGACCCATGG GGTGGACGGT
TTTTATGCGG CGCGGCTGAT CAAGGATGCC AATCACTGA
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| Protein sequence | MSKSHVSERT MAAAAVSAML SEHLPLETAL EQQIHQQSGT SPEMRGRAHE IVVGTIRHMA
LLEATLTRFM QKDLKAKHHY VRAVLLTALY QAQFMRTPIH SAVDEAVKLV KQQPRDHNLS
GFVNAVLRRS TEVELSTTWS AVKDPLKRLA TRYSHPLWLV KRWEKRLGME ATEARLAAAN
AQAPLTLRIH TPKVTVADYL AAAKQAEIEV TVCPEAEETL MLPQGAKVAT LPGYSNGWFA
VQDRAAQAVA RLLAPQAGEA ILDACAAPGG KSAHLVALGG AGVVITALDS AQQRLERMGE
NMARLGIRSQ VKLRCADATQ PIEGLFDRAL VDAPCTGTGV IRRHPDIKWR RNPSGLAEVV
KQQQQILQSV AAAVKPGGLL VYATCSLEPD ENEQQVARFL KEHPQWKRLP LEAGMAGILP
EWIDSAGDLR TEPATHGVDG FYAARLIKDA NH
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