Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3665 |
Symbol | |
ID | 4481475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4602858 |
End bp | 4603400 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639724421 |
Product | single-strand binding protein |
Protein accession | YP_867556 |
Protein GI | 117926939 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000121761 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTTT CCCTTAATAA AGTACAACTG ATTGGCAATC TGGGTGCAGA CCCAGAGGTG CGCTATACCC AGGCGGGTAA GGCGATGGCC AATTTAAACA TTGCCACCAG TGAATCATGG AACGATCAAC AGGGCCAGCG CCAAGAGCGT ACCGAATGGC ACCGGGTTGT GATCTTTGGC AAAGCCGCAG AGATCGCCCA GCAATATATG CGTAAAGGCA GCAAGGTCTA TATCGAAGGG CAGCTGCAAA CCCGCAAATG GCAGGATCAG AGCGGTCAAG ATCGCTACAC CACCGAAGTG GTGATCAGCG GCTTTAATGG GCAGATGATT ATCTTAGACC GGCCCAGCGG CGGCGGCTTT GGTGGCGGCG GGGCCCCAGC CGGAGGTTTT GGCGGTGGTG CGCCCAACGC GGGTTTTGCT GGCGGCCCCC CCCAGGGTAG TCCTGCCCCG AGCGGTGCTG CCAACCAAGG CAGCGGCACC TTCTCATCCC CGGCGGATAC CTTTAATGAA GGCCCCGACT TTGATGATGA TATCCCCTTT TAG
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Protein sequence | MAFSLNKVQL IGNLGADPEV RYTQAGKAMA NLNIATSESW NDQQGQRQER TEWHRVVIFG KAAEIAQQYM RKGSKVYIEG QLQTRKWQDQ SGQDRYTTEV VISGFNGQMI ILDRPSGGGF GGGGAPAGGF GGGAPNAGFA GGPPQGSPAP SGAANQGSGT FSSPADTFNE GPDFDDDIPF
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