Gene Mmc1_3665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3665 
Symbol 
ID4481475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4602858 
End bp4603400 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content57% 
IMG OID639724421 
Productsingle-strand binding protein 
Protein accessionYP_867556 
Protein GI117926939 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000121761 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTT CCCTTAATAA AGTACAACTG ATTGGCAATC TGGGTGCAGA CCCAGAGGTG 
CGCTATACCC AGGCGGGTAA GGCGATGGCC AATTTAAACA TTGCCACCAG TGAATCATGG
AACGATCAAC AGGGCCAGCG CCAAGAGCGT ACCGAATGGC ACCGGGTTGT GATCTTTGGC
AAAGCCGCAG AGATCGCCCA GCAATATATG CGTAAAGGCA GCAAGGTCTA TATCGAAGGG
CAGCTGCAAA CCCGCAAATG GCAGGATCAG AGCGGTCAAG ATCGCTACAC CACCGAAGTG
GTGATCAGCG GCTTTAATGG GCAGATGATT ATCTTAGACC GGCCCAGCGG CGGCGGCTTT
GGTGGCGGCG GGGCCCCAGC CGGAGGTTTT GGCGGTGGTG CGCCCAACGC GGGTTTTGCT
GGCGGCCCCC CCCAGGGTAG TCCTGCCCCG AGCGGTGCTG CCAACCAAGG CAGCGGCACC
TTCTCATCCC CGGCGGATAC CTTTAATGAA GGCCCCGACT TTGATGATGA TATCCCCTTT
TAG
 
Protein sequence
MAFSLNKVQL IGNLGADPEV RYTQAGKAMA NLNIATSESW NDQQGQRQER TEWHRVVIFG 
KAAEIAQQYM RKGSKVYIEG QLQTRKWQDQ SGQDRYTTEV VISGFNGQMI ILDRPSGGGF
GGGGAPAGGF GGGAPNAGFA GGPPQGSPAP SGAANQGSGT FSSPADTFNE GPDFDDDIPF