| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3660 |
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| Symbol | |
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| ID | 4482372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4596615 |
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| End bp | 4598966 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724416 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_867551 |
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| Protein GI | 117926934 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.739108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAG TGGTCATCGT GGAATCACCC GCCAAGGCGA AAACCATCAA TAAATTCCTG
GGTCGTGGCT ATAAAGTGGT GGCGACCTAC GGGCATATTC GTGATCTACC CAGCAAAAAT
GGCTCGGTGG ATACGGAGCA CGGTTTTGCT ATGAAATATA GCGTGCCCAA GGATTCCACC
AAACGGGTGG ATGAGTTGGC TAAGGCTGTG AAGGGGGCTG AGCAAGTATT GCTGGCAACC
GACCCTGACC GCGAGGGAGA GGCGATCTCC TGGCACGTCT ATGAGGTTTT GAATGAGAAA
AAACTGCTAG AAAATGTGCA GGTTAAGCGG GTGGTGTTCC ATGAGATCAC CAAAACCGCC
ATTCAGGACG CCGTTGCCCA CGCCCGGGAT GTGGATATGG ATATGGTGAA CGCCCAACAG
GCACGGCGGG CGTTGGACTA TTTGGTGGGT TTTAATCTGA GTCCGCTTTT GTGGCGCAAG
GTACGCCGGG GTCTCTCGGC GGGTCGGGTA CAGTCGGTGG CGTTGCGTCT GGTGTGCGAG
CGCGAGGCGG AGATTCAAGC TTTTGAGGCT CGTGAATATT GGAGCATTAC CGCTCTGGCG
GCGCAGGCGG CACAATCCGC ACCACGCCCC TTTGAGGCGC GTCTGGCGGT GGCCGATGGG
GAGAAACTCT CCAAATTTTC CATTGGTGAT GAGGCCTATG CCAAAAGATT GATTAAGGCG
GTGGAGAAGC GTCCACTGTA TGTTTCCGAA ATTGAGAAAA AGCAGAGCAA GCGCAATCCT
GCGCCCCCCT TTATCACCTC GACTTTACAG CAGGAGGCCT CGCGCAAGCT GGGTTTTTCG
GCCAAAAAAA CCATGACCGT GGCCCAACGC CTCTATGAAG GTATGGAGGT GCCGACGGCG
GATGGCGGTA AAGAGACGGT AGGCCTTATT AGCTATATGC GTACCGATTC GGTGAACTTG
GCCAATGAGG CCATTGAGTC GATTCGCAAA CAGATTGAGA TCCGTTATGG CAAGGAGTAT
CTGCCCAAGT CACCGCGCAA ATACAAATCC TCGGCCAAAA ATGCCCAGGA GGCCCACGAA
GCGATTCGCC CCACGGATGT TATCCGCACA CCAGAGATGC TGCGGGAGAT CCTGGAGAAG
GATCAATTTC GTCTATATGA GTTGATCTGG AAACGCACCG TAGCCTGCCA AATGGCCCAA
GCCAAAATAG ATAAAGTGGC GGCCAATTTG TCGGTGGATA GTCAAGACCC CAACGCGGCC
TACCGTTTTC GCGCCACCGG CTCCTCTGTG GCTTTTGCTG GCTTTATGAA GGTCTATATG
GAGGGCAAAG ATGAGGTATC GGCCCAAGAC CGCGAAGATG ACGATGATGA TAATGAGAGC
ATTCTGCCGC CGCTGGAGGT AGGACAGCAG CTTGAGCAAA AGTCGCTGGA TGCCCGTCAG
CACTTTACCG AGCCGCCGCC GCGTTATACA GAAGCCACCC TGGTTAAAGT GCTGGAGAGC
TACGGTATTG GCCGACCCTC CACCTATGCG CCGACCATGT CCACGCTACA GGATCGGGGT
TATGTCAAGC TGGATGCCCG CAAATTTTAT CCCGAAGATG TGGGTATGGT GGTCAACAGC
TACCTGACCA AACACTTCTC TACCTATGTG GATTATAACT TTACCGCCAA TCTGGAGGAT
CAGTTGGATG CGGTCTCCCG GGGGGAGAAG AGTTGGGTCC CTTTGATGGA GGATTTTTGG
CAGCCCTTTA TTCAGCAGAT CACGCTCAAG GATGAGACCA CCTCTAAAGA GGAGGTAACC
ACCGAGCAGA TTGATGAGCC GTGTCCCAAA TGTGGCGCAC CGCTCTCCAT CAAACTGGGC
CGCTTTGGTA AGTTTAAGGC CTGTACCGGT TATCCAGAGT GCAAGCATAC CGAGCCGCTC
AATAAGGAGG AGGAGGTCTC GCGTCCAGAG CCGGAGCTTA CCGACATTCC CTGTGATAAG
TGTGGCAAAC CCATGCTGAT TAAAGAGGGG CGCTACGGCA AATATTATGG GTGTTCTGGT
GCACCGGAGT GCAAAAATAA CCAGCCGCTG AATAAACCCA GGGATACGGG TGTGGCCTGT
CCGAGCTGTG GTCAGGGCAC TTTTTTGGAG AAGAAATCCA GACGGGGTAA GATCTTTTAC
TCCTGTTCCA ACTATCCCAA GTGCAAGCAG GCGTTGTGGG ATGAGCCTTT GGAGATCCCC
TGTCCCAAGT GTCAGGCTCC CTTTGTGACC AAAAAGGTGA CCAAAACCCG GGGTACCGAG
CATATTTGCG TGGCGGAGGG GTGTGACTAT AAAGAGGTGG TCGAGGCGCC CATAAAAACC
TCCAAGCAGT AA
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| Protein sequence | MTAVVIVESP AKAKTINKFL GRGYKVVATY GHIRDLPSKN GSVDTEHGFA MKYSVPKDST
KRVDELAKAV KGAEQVLLAT DPDREGEAIS WHVYEVLNEK KLLENVQVKR VVFHEITKTA
IQDAVAHARD VDMDMVNAQQ ARRALDYLVG FNLSPLLWRK VRRGLSAGRV QSVALRLVCE
REAEIQAFEA REYWSITALA AQAAQSAPRP FEARLAVADG EKLSKFSIGD EAYAKRLIKA
VEKRPLYVSE IEKKQSKRNP APPFITSTLQ QEASRKLGFS AKKTMTVAQR LYEGMEVPTA
DGGKETVGLI SYMRTDSVNL ANEAIESIRK QIEIRYGKEY LPKSPRKYKS SAKNAQEAHE
AIRPTDVIRT PEMLREILEK DQFRLYELIW KRTVACQMAQ AKIDKVAANL SVDSQDPNAA
YRFRATGSSV AFAGFMKVYM EGKDEVSAQD REDDDDDNES ILPPLEVGQQ LEQKSLDARQ
HFTEPPPRYT EATLVKVLES YGIGRPSTYA PTMSTLQDRG YVKLDARKFY PEDVGMVVNS
YLTKHFSTYV DYNFTANLED QLDAVSRGEK SWVPLMEDFW QPFIQQITLK DETTSKEEVT
TEQIDEPCPK CGAPLSIKLG RFGKFKACTG YPECKHTEPL NKEEEVSRPE PELTDIPCDK
CGKPMLIKEG RYGKYYGCSG APECKNNQPL NKPRDTGVAC PSCGQGTFLE KKSRRGKIFY
SCSNYPKCKQ ALWDEPLEIP CPKCQAPFVT KKVTKTRGTE HICVAEGCDY KEVVEAPIKT
SKQ
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