Gene Mmc1_3653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3653 
Symbol 
ID4482364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4591013 
End bp4591516 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content49% 
IMG OID639724408 
ProductCheW protein 
Protein accessionYP_867544 
Protein GI117926927 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGCA AGGCCATTGT TGAAACCACT CAATTTCTTA CCTTTACCTT GGAAAAAGAG 
GTGTTTGCCG TAGACATTGC ACGGGTACGG GAGGTGCTGG AGTTTACCTC CGTCACCAAA
GTCCCCCGCA CGCCTGATTT TATGAGTGGT GTGATCAATT TACGGGGTAG TGTGGTACCG
GTGGTGGATT TGCGTATCAA ATTTGGTATG CAAGCGGCTG GCAAAACTGT CGATACCTGC
ATCATAATCA TTGAAATTGA GAACGCTGGT GAAAAAACCG TGCTGGGTGC CTTGGCCGAT
TCGGTTAAAG AGGTGATGAG CCTAGAACCG GAACATATCG AAAACGCACC CAAACTGGGT
ACCAACCTGC GCACCGAGTT TATCCGTGGC ATGGGTAAAG AGGGCAATAC GTTTATTATT
ATCCTCGATA CCGATCGGGT GTTTAGTGCC GAAGAGCTCT CTTCTATGCA CGATGGCTCT
GACGAGAGCA GCTCTGCCGC CTAA
 
Protein sequence
MSGKAIVETT QFLTFTLEKE VFAVDIARVR EVLEFTSVTK VPRTPDFMSG VINLRGSVVP 
VVDLRIKFGM QAAGKTVDTC IIIIEIENAG EKTVLGALAD SVKEVMSLEP EHIENAPKLG
TNLRTEFIRG MGKEGNTFII ILDTDRVFSA EELSSMHDGS DESSSAA