Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3649 |
Symbol | |
ID | 4482360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4587619 |
End bp | 4588293 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724404 |
Product | ribulose-5-phosphate 3-epimerase |
Protein accession | YP_867540 |
Protein GI | 117926923 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAA TAGCCCCCTC TATCCTCTCC GCTGACTTTG CCCGCTTGGG CGAAGAGATC CGTATGGTAG AGGCGGCTGG TGCCGACTAT ATCCATGTGG ATGTTATGGA TGGCCACTTT GTGCCCAACC TAACCATGGG CCCACCGGTG GTGGCCTCTA TTCGTAAGGT AGCCACCAAA CCCCTGGATG TCCACCTGAT GATCTCGCCG GTAGACCCCT ACATTGAGGC CTTTGCCCAA GCGGGTAGTG ACATTATTAC CGTGCATGCC GAGGCGACCC ACCATCTTGA TCGTACCCTT AACCTTATCA AAGAGTATGG AAAAAAGGCT GGGGTTTCTA TTAATCCCGC CACCCCGGTG AGCGCCATTG AAAATGTCAT GCACTTGGTC GATATGGTAT TGGTGATGAG TGTGAACCCC GGTTTTGGTG GGCAGAGCTT TATTCCCCAC AGCTTAAACA AGGTGCGCCA AGTGCGGGAG ATGATCAACC GCCAGGATCG CCCCATTGAA CTCCAGGTAG ATGGCGGCGT AAAACCGGAT AACATCGCCA AAATAGCCGA AGCAGGGGCC AATGTGTTTG TGGCCGGTTC AGCCATCTTT TCCCAACCGG ACTACCGGGC TGTCATGGAT AGCATGCATA AAAATGTGCG GGATTCCCAA AAAAATCCAG ATTAA
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Protein sequence | MIKIAPSILS ADFARLGEEI RMVEAAGADY IHVDVMDGHF VPNLTMGPPV VASIRKVATK PLDVHLMISP VDPYIEAFAQ AGSDIITVHA EATHHLDRTL NLIKEYGKKA GVSINPATPV SAIENVMHLV DMVLVMSVNP GFGGQSFIPH SLNKVRQVRE MINRQDRPIE LQVDGGVKPD NIAKIAEAGA NVFVAGSAIF SQPDYRAVMD SMHKNVRDSQ KNPD
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