Gene Mmc1_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3649 
Symbol 
ID4482360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4587619 
End bp4588293 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content52% 
IMG OID639724404 
Productribulose-5-phosphate 3-epimerase 
Protein accessionYP_867540 
Protein GI117926923 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA TAGCCCCCTC TATCCTCTCC GCTGACTTTG CCCGCTTGGG CGAAGAGATC 
CGTATGGTAG AGGCGGCTGG TGCCGACTAT ATCCATGTGG ATGTTATGGA TGGCCACTTT
GTGCCCAACC TAACCATGGG CCCACCGGTG GTGGCCTCTA TTCGTAAGGT AGCCACCAAA
CCCCTGGATG TCCACCTGAT GATCTCGCCG GTAGACCCCT ACATTGAGGC CTTTGCCCAA
GCGGGTAGTG ACATTATTAC CGTGCATGCC GAGGCGACCC ACCATCTTGA TCGTACCCTT
AACCTTATCA AAGAGTATGG AAAAAAGGCT GGGGTTTCTA TTAATCCCGC CACCCCGGTG
AGCGCCATTG AAAATGTCAT GCACTTGGTC GATATGGTAT TGGTGATGAG TGTGAACCCC
GGTTTTGGTG GGCAGAGCTT TATTCCCCAC AGCTTAAACA AGGTGCGCCA AGTGCGGGAG
ATGATCAACC GCCAGGATCG CCCCATTGAA CTCCAGGTAG ATGGCGGCGT AAAACCGGAT
AACATCGCCA AAATAGCCGA AGCAGGGGCC AATGTGTTTG TGGCCGGTTC AGCCATCTTT
TCCCAACCGG ACTACCGGGC TGTCATGGAT AGCATGCATA AAAATGTGCG GGATTCCCAA
AAAAATCCAG ATTAA
 
Protein sequence
MIKIAPSILS ADFARLGEEI RMVEAAGADY IHVDVMDGHF VPNLTMGPPV VASIRKVATK 
PLDVHLMISP VDPYIEAFAQ AGSDIITVHA EATHHLDRTL NLIKEYGKKA GVSINPATPV
SAIENVMHLV DMVLVMSVNP GFGGQSFIPH SLNKVRQVRE MINRQDRPIE LQVDGGVKPD
NIAKIAEAGA NVFVAGSAIF SQPDYRAVMD SMHKNVRDSQ KNPD