Gene Mmc1_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3648 
Symbol 
ID4482359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4586743 
End bp4587147 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content53% 
IMG OID639724403 
Producthypothetical protein 
Protein accessionYP_867539 
Protein GI117926922 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAC GCCATGTCTT AGCGGTCAAC AGTGGTCGTG CCCAAGCCTT CATTGATATA 
ACCGATGGGG TCAATGCCCT AATAAGCAAA GCGAAAATGC AACAGGGTCT ATGCCACCTG
TTTGTGCCCC ATACCACCGC TGGCATCACC GTCAATGAAA ACTGTGATCC CGACGTGGCT
CGGGATATAT TGGCGACCCT GGATCAATTG GTGCCCATCC ATGGGAACTA CCGCCATGCC
GAAGGCAACA GCCACGCCCA CCTGAAAGCA AGCTTGATGG GGCACGCTCT AAGTGTACCA
ATCGAGGGGG GTAAACTGTT GCTCGGTACT TGGCAAGGCC TCTATTTTAC CGAATTTGAC
GGACCCCGCG CCCGCAAGGT CATCCTAACC CTTAGCGAGG GTTAG
 
Protein sequence
MLKRHVLAVN SGRAQAFIDI TDGVNALISK AKMQQGLCHL FVPHTTAGIT VNENCDPDVA 
RDILATLDQL VPIHGNYRHA EGNSHAHLKA SLMGHALSVP IEGGKLLLGT WQGLYFTEFD
GPRARKVILT LSEG