Gene Mmc1_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3643 
Symbol 
ID4483830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4579153 
End bp4580481 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content54% 
IMG OID639724394 
Producttrigger factor 
Protein accessionYP_867534 
Protein GI117926917 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 
TIGRFAM ID[TIGR00115] trigger factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000676288 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.562655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCA ACGTTGTAGA GAATGGCCTT TTTGATCGCG ATATCACCAT CACCGTTGCG 
GCGGAGAAGG TCGATGCGCT ACTCAGCCAA GAAATGACCA AAACGGCCGC TCAGGTTCGT
CTCCCTGGTT TTCGGGCGGG CAAGGTGCCT ACCAAGATGA TTGAGCAACG CTTTGGGGCC
AGTATCCGGG CTGAGGTTGC TGAACAGCTG TTTCGGGATT CATACCCCAC CGCATTGATG
GAAAAAGGGC TACGCCCCGT GGGTCAGCCT GAGCTGGATC TGGTGGAGTT GGAGAAGGGC
AAGCCTTTCA CCTACACGGC CAAAATTCAG ATTTTTCCCG TGATTGAGCC CAAGGATTAC
ACCGGTATGA GCTTGACCAA ACCGGTGGTG ACCATCCAGG ATTCTGATGT TGAGACGGTG
ATCACCCGGG TACGCGAGGC CAATGCCGAA TATCGTACCC AAGAGGGTGT GGCGGCTGCC
AGCGGTGACC GCATGACCTT TGATTTTGAG GGCTTTGTGG ATGGTGAAGC CTTTGAGGGC
GGCAAAGCGG AAGATTATGT GTTAGAGCTG GGTTCCAACC GGTTTATCCC TGGTTTTGAG
GATCAGCTTA TCGGTGCCAA GGGGGGGGAT GCGCTGGAGG TTAAGGTCAC CTTCCCAGAA
GATTATCATG GTACCCAGTT GGCGGGCAAA GAGGCGATTT TTAAGTGTGT GGTAAAAGCC
ATCGAAAGCC GTGAGCTGCC AGAGGTGGAC GAAGAGCTGG CGAAAAAAGC CGGTGTCCAA
GAGGGCGGCG TGGAGGCGAT GAAGCAAGAG ATCCACGAGC GTCTGGTCAA AGAGGCCGAC
AAGGTAGCCA AGCAAGAGAT GAAACAGCAG GTGTTTAAGC TGCTGTTGGA AAACAATCCC
AATGAGCTGC CCAGTCAGAT GGTGGATCAT GAGATTGAGC AGATGGTGGC CACGGCGAAA
GAGGAGTACA GCCGTCAAGG GGTTGATCCC GAGCAGCTTG GTTTTACCGA TGAGACTTGG
CGTAACCAGT ACGCTGAAAA GGCCAAAGAG CGCATCATTC TGGGTCTGTT GATGGGCAGT
ATCGTCAGCA AAGAGAATCT GGAAATTGAT GATCAGGCGG TTGAAGCCCA CATTGACGCG
CTGGTGCAGC AGTTTGCGGC TGGGGACTAT GCTGAGCAGC TCAAGGCGCA GCTCAAGAAG
GATAAGGCGC GTTTAGAGGA GTTCCGGGGT GCCGCGTTGG AAGAGAAAAC CGTGGCTTGG
TTGATTGAAC AGGGCACCGT GACAGAAGAA GAAAAATCTT TTGAAGAGTT GGTGGCGCAG
CGCGGTTAA
 
Protein sequence
MEVNVVENGL FDRDITITVA AEKVDALLSQ EMTKTAAQVR LPGFRAGKVP TKMIEQRFGA 
SIRAEVAEQL FRDSYPTALM EKGLRPVGQP ELDLVELEKG KPFTYTAKIQ IFPVIEPKDY
TGMSLTKPVV TIQDSDVETV ITRVREANAE YRTQEGVAAA SGDRMTFDFE GFVDGEAFEG
GKAEDYVLEL GSNRFIPGFE DQLIGAKGGD ALEVKVTFPE DYHGTQLAGK EAIFKCVVKA
IESRELPEVD EELAKKAGVQ EGGVEAMKQE IHERLVKEAD KVAKQEMKQQ VFKLLLENNP
NELPSQMVDH EIEQMVATAK EEYSRQGVDP EQLGFTDETW RNQYAEKAKE RIILGLLMGS
IVSKENLEID DQAVEAHIDA LVQQFAAGDY AEQLKAQLKK DKARLEEFRG AALEEKTVAW
LIEQGTVTEE EKSFEELVAQ RG