Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3643 |
Symbol | |
ID | 4483830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4579153 |
End bp | 4580481 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639724394 |
Product | trigger factor |
Protein accession | YP_867534 |
Protein GI | 117926917 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000676288 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.562655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTCA ACGTTGTAGA GAATGGCCTT TTTGATCGCG ATATCACCAT CACCGTTGCG GCGGAGAAGG TCGATGCGCT ACTCAGCCAA GAAATGACCA AAACGGCCGC TCAGGTTCGT CTCCCTGGTT TTCGGGCGGG CAAGGTGCCT ACCAAGATGA TTGAGCAACG CTTTGGGGCC AGTATCCGGG CTGAGGTTGC TGAACAGCTG TTTCGGGATT CATACCCCAC CGCATTGATG GAAAAAGGGC TACGCCCCGT GGGTCAGCCT GAGCTGGATC TGGTGGAGTT GGAGAAGGGC AAGCCTTTCA CCTACACGGC CAAAATTCAG ATTTTTCCCG TGATTGAGCC CAAGGATTAC ACCGGTATGA GCTTGACCAA ACCGGTGGTG ACCATCCAGG ATTCTGATGT TGAGACGGTG ATCACCCGGG TACGCGAGGC CAATGCCGAA TATCGTACCC AAGAGGGTGT GGCGGCTGCC AGCGGTGACC GCATGACCTT TGATTTTGAG GGCTTTGTGG ATGGTGAAGC CTTTGAGGGC GGCAAAGCGG AAGATTATGT GTTAGAGCTG GGTTCCAACC GGTTTATCCC TGGTTTTGAG GATCAGCTTA TCGGTGCCAA GGGGGGGGAT GCGCTGGAGG TTAAGGTCAC CTTCCCAGAA GATTATCATG GTACCCAGTT GGCGGGCAAA GAGGCGATTT TTAAGTGTGT GGTAAAAGCC ATCGAAAGCC GTGAGCTGCC AGAGGTGGAC GAAGAGCTGG CGAAAAAAGC CGGTGTCCAA GAGGGCGGCG TGGAGGCGAT GAAGCAAGAG ATCCACGAGC GTCTGGTCAA AGAGGCCGAC AAGGTAGCCA AGCAAGAGAT GAAACAGCAG GTGTTTAAGC TGCTGTTGGA AAACAATCCC AATGAGCTGC CCAGTCAGAT GGTGGATCAT GAGATTGAGC AGATGGTGGC CACGGCGAAA GAGGAGTACA GCCGTCAAGG GGTTGATCCC GAGCAGCTTG GTTTTACCGA TGAGACTTGG CGTAACCAGT ACGCTGAAAA GGCCAAAGAG CGCATCATTC TGGGTCTGTT GATGGGCAGT ATCGTCAGCA AAGAGAATCT GGAAATTGAT GATCAGGCGG TTGAAGCCCA CATTGACGCG CTGGTGCAGC AGTTTGCGGC TGGGGACTAT GCTGAGCAGC TCAAGGCGCA GCTCAAGAAG GATAAGGCGC GTTTAGAGGA GTTCCGGGGT GCCGCGTTGG AAGAGAAAAC CGTGGCTTGG TTGATTGAAC AGGGCACCGT GACAGAAGAA GAAAAATCTT TTGAAGAGTT GGTGGCGCAG CGCGGTTAA
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Protein sequence | MEVNVVENGL FDRDITITVA AEKVDALLSQ EMTKTAAQVR LPGFRAGKVP TKMIEQRFGA SIRAEVAEQL FRDSYPTALM EKGLRPVGQP ELDLVELEKG KPFTYTAKIQ IFPVIEPKDY TGMSLTKPVV TIQDSDVETV ITRVREANAE YRTQEGVAAA SGDRMTFDFE GFVDGEAFEG GKAEDYVLEL GSNRFIPGFE DQLIGAKGGD ALEVKVTFPE DYHGTQLAGK EAIFKCVVKA IESRELPEVD EELAKKAGVQ EGGVEAMKQE IHERLVKEAD KVAKQEMKQQ VFKLLLENNP NELPSQMVDH EIEQMVATAK EEYSRQGVDP EQLGFTDETW RNQYAEKAKE RIILGLLMGS IVSKENLEID DQAVEAHIDA LVQQFAAGDY AEQLKAQLKK DKARLEEFRG AALEEKTVAW LIEQGTVTEE EKSFEELVAQ RG
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