| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3640 |
|---|
| Symbol | |
|---|
| ID | 4483827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 4574224 |
|---|
| End bp | 4576662 |
|---|
| Gene Length | 2439 bp |
|---|
| Protein Length | 812 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639724391 |
|---|
| Product | Lon-A peptidase |
|---|
| Protein accession | YP_867531 |
|---|
| Protein GI | 117926914 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0005782 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.311751 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG AAACCTACGA CTCGTTAGGG CTTGCCGTGC GTATGCCGGT ATTACCGCTA
CGGGATATCG TTGTTTTTCC CCATATGATT GTGCCCCTGT TTGTGGGGCG TGATCGTTCT
ATTCGCGCGT TGGATGCGGT TACCGCGACC AATGAAGAGG ATCGACGTAT CCTTTTGGTG
ACCCAGAAGG AGGCCTCAAC CGACACTCCG TCGGAAGAGG AGCTCTACAC GATGGGGGTC
GAGGGTTCGA TTCTCCAGAT TCTCAAGCTC CCTGACGGCA CGGTAAAGGT GCTGGTGGAG
GGGCTACGAC GTATGCGGGT ACGGCGCTAT ATTCAGAGCG AACCCCATTT TGAGGCCGAG
GCTGTGCCCC TACAGCCAGC CAGCTACAGC GATGCGGAAG CACGGGCCTT AATGCGCTCG
GTGATCACCC AGTTTGAGCA GTATGGTAAG CTCAACAAAA AGGTGCCGCC AGAGGTATTA
ATGACACTGC AATCCATTGA GGATCCGGTG CGTTTGGCCA ATACGGCGGC GTCGCATCTG
ACCCTCAAGG TCTCTGACAA GCAGCAGTTG TTGGAGGTGG ATGGGGTGGT GGACCAACTG
GAGCAGCTCT ATCTTCTGTT AGAACGGGAG ATAGAGGTGA TTCAGGTGGA AAAGCGCATC
CGTGGCCGGG TTAAGAAGCA GATGGAGAAA AGCCACCGCG ACTACTATCT GAATGAGCAG
ATGAAGGCGA TTCAGAAAGA GTTGGGGGAT GAGGGTTCGG AGAAGGATGA GATCACCGAA
CTGACCGAAA AGATCGAAGC AGCGGGTATG CCCGCTGAGG TTAAAAAGAA GGCCGATGGT
GAGCTTAAAA AGCTTAAGCA GATGTCCCCC ATGTCGGCTG AGGCCACGGT GGTGCGGACC
TACATCGACT GGTTGGTTTC GCTGCCCTGG AACAAAGAGA GCGAGCTCAA GCATGACCTT
ACAGAGGCCG AGACCATCTT GGAAGAGGAT CATGATGGTC TGAAGAAGGT CAAAGAGCGC
ATATTGGAGT ATCTGGCGGT ACAGAAGAAA GTGGGCAAGA TGAAGGGTCC CATTCTCTGT
CTGGTGGGAC CGCCGGGGGT GGGTAAGACT TCGCTGGCGA AATCCATTGC ACGGGCCACG
GGGCGCGAGT ATGTGCGTAT TTCACTGGGT GGGGTACGGG ATGAGGCGGA GATTCGCGGT
CATCGTCGCA CCTACATTGG TTCTATGCCG GGTAAGATTA TTCAATCCAT GAAGCGGGCA
GGCACGCGTA ATCCGCTGTT TTTGCTTGAT GAGATTGATA AGGTAGGCTC TGACTACCGG
GGTGATCCGT CGTCGGCGTT GTTAGAGGTG TTGGACCCCG AACAGAATGT GGCCTTTAGT
GACCACTATA TGGAGGTGGA TTACAACCTC AGCAATGTGA TGTTTATTAC CACCGCCAAC
AGCCTGAACA TTGCGCGTCC CCTGTTGGAC CGTATGGAGG TGATCCGTCT GGCGGGGTAT
ACCGAGGATG AAAAGCTGCG CATTGCCACC CGCTATCTGA TTCCCCGACA GATGGAAGAG
CATGGCTTGA CGGAGCAGGA GTTGAGCATT TCGTCGGGTA CCATTACCGA TATTATCCGC
TACTACACCC GGGAGTCGGG GGTGCGTAAT CTGGAGCGGG AGGTTGGGGC GTTGTGTCGT
AAGGCGGCGC GTATTTTGTT GACGGAAGAG AATCGTAAAA AGGTCACCAT TACCGCCCAG
AGTTTAGAGA AATATTTGGG TACCCGGCGT TTCCGTTTTG GTATCGCGGA AGAGGCGGAC
ATTGTCGGGG TGACCACGGG TTTGGCGTGG ACCGAGGTGG GTGGGGAGAT CCTCACCATT
GAAGCGACCC ATCTGGAGGG CAAGGGCTCC TTTACCATCA CCGGTAAGTT GGGCGATGTG
ATGCAGGAGT CGGTGCAAGC GGCGATGACC TGTGCCCGCA GTATGGCGGA AGGGTGGGGC
ATTAAGGGCG AGTTTTTCCA GAAACGGGAT TTCCATATCC ACGTGCCAGA GGGTGCTACC
CCCAAGGATG GCCCCTCAGC GGGCATTGCT TTATGTACGA CGCTGGTCAG TTGTATGACC
GGTATTGCGG TGTGCAAAGA TGTGGCGATG ACCGGTGAGA TCACCCTGCG TGGTCGGGTG
TTGATTATCG GTGGATTGAA AGAAAAGCTA CTGGCGGCCC ACCGTGCAGG CATTCGACGG
GTGTTGATAC CCGAGGATAA TGTGAAGGAT CTAAAAGAGA TTCCTCAGAG CATCCTTAAA
GATCTGGAGA TCCATCCGGT GCGGCATGTG AGCGAAGTTT TAAAACTGGC TCTGGTCCGC
ATGCCGGAAC AGGTGGATGT GGTGGTTGAA ACCGCCCTAC CCTTGGAAAA GGGGATAGGA
GAAGAGAGTG AACCGCTGGG TAGTGTGCCT CACCACTAA
|
|---|
| Protein sequence | MTEETYDSLG LAVRMPVLPL RDIVVFPHMI VPLFVGRDRS IRALDAVTAT NEEDRRILLV
TQKEASTDTP SEEELYTMGV EGSILQILKL PDGTVKVLVE GLRRMRVRRY IQSEPHFEAE
AVPLQPASYS DAEARALMRS VITQFEQYGK LNKKVPPEVL MTLQSIEDPV RLANTAASHL
TLKVSDKQQL LEVDGVVDQL EQLYLLLERE IEVIQVEKRI RGRVKKQMEK SHRDYYLNEQ
MKAIQKELGD EGSEKDEITE LTEKIEAAGM PAEVKKKADG ELKKLKQMSP MSAEATVVRT
YIDWLVSLPW NKESELKHDL TEAETILEED HDGLKKVKER ILEYLAVQKK VGKMKGPILC
LVGPPGVGKT SLAKSIARAT GREYVRISLG GVRDEAEIRG HRRTYIGSMP GKIIQSMKRA
GTRNPLFLLD EIDKVGSDYR GDPSSALLEV LDPEQNVAFS DHYMEVDYNL SNVMFITTAN
SLNIARPLLD RMEVIRLAGY TEDEKLRIAT RYLIPRQMEE HGLTEQELSI SSGTITDIIR
YYTRESGVRN LEREVGALCR KAARILLTEE NRKKVTITAQ SLEKYLGTRR FRFGIAEEAD
IVGVTTGLAW TEVGGEILTI EATHLEGKGS FTITGKLGDV MQESVQAAMT CARSMAEGWG
IKGEFFQKRD FHIHVPEGAT PKDGPSAGIA LCTTLVSCMT GIAVCKDVAM TGEITLRGRV
LIIGGLKEKL LAAHRAGIRR VLIPEDNVKD LKEIPQSILK DLEIHPVRHV SEVLKLALVR
MPEQVDVVVE TALPLEKGIG EESEPLGSVP HH
|
|---|
| |