Gene Mmc1_3628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3628 
Symbol 
ID4480528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4557363 
End bp4558394 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content54% 
IMG OID639724377 
Productrespiratory-chain NADH dehydrogenase, subunit 1 
Protein accessionYP_867519 
Protein GI117926902 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.154077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT TCATCTCTTC CATTCAAGCG ATGGGCGTGG CGTACTTGGG GGAAACTCTG 
TGGACGCTGG TATGGACCAT CCTTAAAATT GCCGTACTCA TCGCGCCGAT TCTGTTTTGT
GTCACCTATC TGACCCTAGC AGAGCGTCGT TTGATTGGCT TTATGCAGGT CCGTTTGGGT
CCCAACCGGG TGGGTGTGTT TGGTATCCTG CAACCCCTGG CGGATGCGGT TAAGCTCTTC
GTCAAGGAGA CCATGCTGCC AGCCAAGGCG CACCGGACGA TGTTTATCCT TGCGCCGATT
TTGACCTTCT CCACGGCGTT GGTTAGCTGG GCGGTGGTTC CCTTCTCACC GGAGCTGGTG
TTGGCAGATG TCAACGTCGG GGTGCTGTTT ATTTTGGCGA TGTCCTCGCT GGGGGCCTAT
GGGGTGTTGC TATCGGGCTG GGCGTCCAAC ACCCGCTACT CTTTGTTGGG GGGGTTACGT
AGCGCGGCCC AGATGATCTC TTATGAGGTC TCTATGGGCT TTACCCTGGT ACCGGTGATT
ATGCTCTCGG GCAGTCTTAA CCTGGGGGAT ATTGTGGAAT CGCAGAAGGG GCTGTGGTAT
GCCTTGCCCT TGCTGCCAGG GTTTTTCATT TACTTTATCT CGGTGGTGGC GGAGACCAAC
CGCGCCCCTT TCGATTTGCC TGAGGCTGAA GCGGAGCTGG TTTCGGGTTT TTGTACCGAA
TATTCAGCCA TGACCTACGG CATGTTTTTT CTGGGTGAAT ATGCCAACAT CATTATGGTG
TCGGTATTGG GTTCGCTGAT GTTCTTGGGT GGTTGGTTGC CCCCGATTGA GGCACTGAGT
TTTATACCCG GCATTGTGTG GTTAATTCTC AAAACCGGCG TGTTGATCTT CTTCTTCCTA
TGGCTGCGTG CCACCTTCCC CCGCTACCGG TATGACCAAC TGATGCGGTT GGGTTGGAAG
GTGTTTTTAC CCATCTCGCT GGCGTGGATC TTTATCGTCG GCCTTGCCAT GCATCTACTG
GATATGGCGT AA
 
Protein sequence
MAEFISSIQA MGVAYLGETL WTLVWTILKI AVLIAPILFC VTYLTLAERR LIGFMQVRLG 
PNRVGVFGIL QPLADAVKLF VKETMLPAKA HRTMFILAPI LTFSTALVSW AVVPFSPELV
LADVNVGVLF ILAMSSLGAY GVLLSGWASN TRYSLLGGLR SAAQMISYEV SMGFTLVPVI
MLSGSLNLGD IVESQKGLWY ALPLLPGFFI YFISVVAETN RAPFDLPEAE AELVSGFCTE
YSAMTYGMFF LGEYANIIMV SVLGSLMFLG GWLPPIEALS FIPGIVWLIL KTGVLIFFFL
WLRATFPRYR YDQLMRLGWK VFLPISLAWI FIVGLAMHLL DMA