| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3619 |
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| Symbol | |
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| ID | 4480519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4547406 |
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| End bp | 4548491 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639724368 |
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| Product | chorismate synthase |
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| Protein accession | YP_867510 |
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| Protein GI | 117926893 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000281464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.087707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGCA GTCAGATTGG GACACTATTT CAGGTAGCCA CATTTGGTGA GAGCCATGGT
TTGGCATTGG GTGGGGTGGT GGATGGGTGT CCGGCGGGAT TGGAGCTGAG TGAGGCGGAT
TTGCAGGGGG ATTTAAACCG GCGTCGTCCT GGGCAGAGTC GTTTTACCAC GCAGCGGCAG
GAGCGGGATG AGGTAAAGAT TTTATCGGGG GTTTTTGAGG GTCGTACCAC GGGCACGCCC
ATTGGATTTA TTATTGAGAA TGAGGATCAG CGTTCTAAGG ATTACAGTGA GATTAAGGAT
AAATTTCGGC CTGGGCATGC GGATTTTACC TATTGGAGCA AGTATGGCAA TCGGGATTAT
CGCGGGGGTG GTCGCAGTAG TGCGCGGGAG ACGGCGATAC GGGTTGCGGC GGGTGCCATT
GCCAAGAAGT TATTAAGGCA GGCGGAGGGG GTGACGGTTC GGGGGGCATT GACGGGTATG
GGTCCGGTGG TGATTGAGCC GTCGCGGTGG GATTGGGCGG AGGTTGAGCG CAACCATTTT
TTTAGTCCGG ATGCGGGTTC GGTTGGGGAA TTTGAGGCTT ATTTAGAGGG CATTCGTAAG
GCGGGCAATT CGGTAGGGGC TTTTTTGGAG GTGCATGCGG AGGGTGTACC GATTGGATTG
GGTGAGCCTG TTTTTGATCG TTTGGATGCG GATTTGGCGA AGGCGGTGAT GTCGATCAAT
GCGGTTAAGG GGGTAGAGAT TGGTGCGGGC ATGGCGAGTG GTCATGCGAC GGGGGTTGAT
TTTGCTGATG AGATGCGTCC TGGGGTTGAT GCGCGGCATC CTGAGTTTGT GCGCAATCAT
GCGGGTGGTA TTTTGGGTGG TATATCTACG GGGCAGCCGA TTGTGATACG TTTTGCGGTT
AAGCCGACCA GTTCTATTTT GGTACCGCGT CAGTCGGTGG ATGTGCATGG GCAGGCGTGT
GAGGTGGTGA CCAAGGGGCG GCATGATCCG TGTGTGGGGA TACGGGCGGT ACCTATTGCG
GAGGCGATGG TGGCGATGAC GTTAGCGGAT CATTGGTTGC GTTGGCGGGC GAGCAAGCCG
TTGTGA
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| Protein sequence | MAGSQIGTLF QVATFGESHG LALGGVVDGC PAGLELSEAD LQGDLNRRRP GQSRFTTQRQ
ERDEVKILSG VFEGRTTGTP IGFIIENEDQ RSKDYSEIKD KFRPGHADFT YWSKYGNRDY
RGGGRSSARE TAIRVAAGAI AKKLLRQAEG VTVRGALTGM GPVVIEPSRW DWAEVERNHF
FSPDAGSVGE FEAYLEGIRK AGNSVGAFLE VHAEGVPIGL GEPVFDRLDA DLAKAVMSIN
AVKGVEIGAG MASGHATGVD FADEMRPGVD ARHPEFVRNH AGGILGGIST GQPIVIRFAV
KPTSSILVPR QSVDVHGQAC EVVTKGRHDP CVGIRAVPIA EAMVAMTLAD HWLRWRASKP
L
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