| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3618 |
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| Symbol | |
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| ID | 4480518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4544948 |
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| End bp | 4546222 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639724367 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_867509 |
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| Protein GI | 117926892 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.22847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0423889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATAA CCATTGATAA ACTCGCCTCT GGTGGATCCG GCCTCGGCTT CCATGACGGT
ATGGCCATCT TCGTGCCCAA TACCGCCCCC GGTGATCTGG TGGAAATCGA AATAAAAACC
AAACGCAAAC GACACGCCCA CGCCGAGCTG ATAAAAATTA TTCAAGCCAG CCCCAACCGC
TGCGAACCCA TCTGCCCCGT CTACCACCAA TGCGGCGGCT GCCAACTGCA ACATGTTAAC
CAAACCACCC GCAACACCTT CAAAGCCGCC GTGGTCAAAG AAGCCCTACA ACACATCGGC
AAATTTGAAA ACCCACCCAT GCAACCCCTG CAATCCGCCC AACCCGAAAC AGGCTACCGC
CGCCGCTGCG GCCTGAAAAT ATACTGGGTC AGAGACCATG CCGTGGTCGG CTTTTACCAA
ACCGCAAGCA AACGCATCGT CGACCTGCCC AACTGCCCCA TCCTCCACCC TAAATTGGAT
GCCCTCATCC ATCCCATCCG TACCCTGGTG TCCGAATTGA GCGTACGCGA GCGGCTCCCC
CAAGTGGATC TAAGCTGCGG GGATGAAGGG GTGGGTATGA TCCTGCACCT GCTGCGCAAA
CTCTCCGCAA AAGATAAAGA GATTCTAACC ACTTTTGCCC ATACCCATAA AATTGATCAA
TTGTGGATCC AATCTGGCCG TAAAGAGGAC CTTACCCCCT TTATCTCACA AGAGCCCCTC
CGCTACAGCC CCGACGGCAA AAGCCAGCTA AAATTTATGC CCGGCGACTT TACCCAAGCC
CACTTTGAAC AAAACCGCCA ACTGGTCGAG CAAGTGCTCG CCTGGATTGG CCAAGGGCAA
CGGGTGCTGG ACCTGTTTTC TGGCCTCGGT AATTTTACCC TGCCCCTGGC TCGTCAATTT
ACCCGTGTAA CCGGCTATGA GAGCTACGAA CCCGCCGTCA AACGAGGGCG TAGTAATACC
ACCCTACACC CCTCCGTCAC CTTTAAAACC ATGGATCTGT TTAGCGAAAC CGCGCTAAAA
ACACTCCCCC TAAACCAAGT GGATGCCATG GTGGTGGATC CACCACGTGA TGGGGCCGTC
AACCTAGCCA AACAGATCAA AGACGCAGGG GGGCCAGCCA CCATCGTCTG GGTCTCCTGC
GACCCCGCCA CCTTTGCCCG CGATGCCGCC ATTCTCTGCG CAGGCGGCTA TACCATGGAA
CAGGTTAAAC CCCTGGATAT GTTCCCCATG ACCAGCCATG TGGAAGTGGT GGCCCTGTTT
AAACGGCCAT CATAA
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| Protein sequence | MQITIDKLAS GGSGLGFHDG MAIFVPNTAP GDLVEIEIKT KRKRHAHAEL IKIIQASPNR
CEPICPVYHQ CGGCQLQHVN QTTRNTFKAA VVKEALQHIG KFENPPMQPL QSAQPETGYR
RRCGLKIYWV RDHAVVGFYQ TASKRIVDLP NCPILHPKLD ALIHPIRTLV SELSVRERLP
QVDLSCGDEG VGMILHLLRK LSAKDKEILT TFAHTHKIDQ LWIQSGRKED LTPFISQEPL
RYSPDGKSQL KFMPGDFTQA HFEQNRQLVE QVLAWIGQGQ RVLDLFSGLG NFTLPLARQF
TRVTGYESYE PAVKRGRSNT TLHPSVTFKT MDLFSETALK TLPLNQVDAM VVDPPRDGAV
NLAKQIKDAG GPATIVWVSC DPATFARDAA ILCAGGYTME QVKPLDMFPM TSHVEVVALF
KRPS
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