| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3616 |
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| Symbol | |
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| ID | 4480573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4541381 |
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| End bp | 4544233 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639724365 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_867507 |
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| Protein GI | 117926890 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0557208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAG AAAAGAAGAT CATTATCCGT GGTGCCCGGG AACACAACCT GAAAAATATT
CATGTAGAGA TCCCCCGCAA CGCCCTAACC GTGATCACCG GCGTTTCCGG CTCGGGCAAA
TCCTCACTGG CCTTTGATAC CCTCTCCGCT GAAGGCCAGC GGCGTTATGT CGAGTCCCTT
TCTGCCTACG CCCGACAGTT CCTCAGCCTA CAGAATAAAC CCGATGTGGA TGCCATCGAA
GGGCTCGCCC CCAGTATCTC CATTGAGCAA AAATCCACCT CAAAAAATCC CCGCTCCACG
GTGGGCACCG TCACCGAGAT CTACGACTAT CTACGCCTAC TCTATGCCCG GGTTGGACGC
CCCTACTGCT ATGGCTGTGG TCGCCCCATC GAAAGCCAAA CCATCAGCCA GATGGTGGAT
GCGGTGATGG AACTGCCAGA ACGTACCCGC CTGCTGCTGC TCGCGCCCAT CGTGCAAGGG
CGCAAAGGTG AGTACAAAAA AGAGCTACTG GAGCTGCAAA AACAGGGGTT CACCCGAGTG
GTCATTGACG GCGAAACCTA TGACCTTGGC GAAACCCCCA CCCTCAATAA AAAGGTTAAA
CACTCCATTG AGATCCTGGT GGATCGCTTG GTTGTTAAAC CAGACATTCA AACCCGTATG
GCCGACTCGC TGGAGACCGC CCTACGGTTA AGTGAGGGCA TCGCGCGGGT GCAGACCGTG
GAAGATACCC CGCAGGAGTG GCTCTTTTCC GAAAAAAATG CCTGCATTCA CTGCAACATC
TCCTATCCAG AGATTGAACC ACGCCTCTTT TCGTTCAACA ACCCCTTTGG GGCCTGTCCC
AGCTGTGACG GGCTCGGTAC CCAGGAGTTT TTTGATCCAG AGCTGATTGT GCCCAACCCC
AGCCTCTCCC TGCGTGAAGG GGCCATTGCC CCCTGGGCTA AACCGACCCA ACGCATGGCG
CAAGAGTCCC TCTATACCTT GGCAGAGCAC TTTGAGATCA ATGTAAACCT GCCCTGGCAA
GCGCTGCCCG AGCCCTTTCG AGAGATTGTG CTGTTCGGCT CAGGAGATGA GAAGGTCAAG
TTTCGCTGGA AAGGATTTCG CCGCGCCCGC ACCGTACACC GCCCCTGGGA AGGGGTGATC
CATACCATGG AGCGGCGCTA TCTGGAGACC CAATCCGAAG AGCAACGGGA ACAATATCGC
CAATACCGCA ATGCCACACC CTGTACCGCC TGTCAGGGTA AGCGGCTGCG TAAAGAGGCC
CTGCATGTCA AAGTGGGGTC CCGTAATCTG GCGGAGTTTA CCGCACTGCC CCTGCGCGAA
GCGCAACGCG CTATCGAAGA TCTGCAATTA ACCCCCCGGG AACACGCCAT TGCAGAGCGC
ATCCTAAAAG AGGTAACCGA CCGGCTCAAT TTTCTGATCG CCGTGGGGCT CGACTACCTC
ACTCTGGACC GCACAGCGGG TACCCTCTCC GGGGGGGAGA GCCAACGCAT TCGCTTAGCC
AATCAGATTG GTTCCGGCTT GGTCGGGGTG CTCTATATCC TGGATGAACC CTCCATCGGC
CTGCATCAGC GGGATAACCA ACGGCTGCTC GATACCCTGG TGCGCTTGCG GGATCTGGGC
AACACGGTGG TGGTGGTGGA GCATGATGAA GATGCCATTC GTACCGCCGA CTATGTGGTG
GATATGGGCC CCGGTGCCGG AGAACATGGG GGGCAGGTGG TGGCCGCAGG CACACCGGCA
GAGATTATGG CCCATCCCGA CTCCCTGACC GGGCACTATC TCAATGGTCA GCAAACCATT
CCTGTGCCCC AACAACGGCG CCCGGTTGAC CCTAAGCGGT TGATTACCCT CAAAGAGGTC
TCGACCCACA ATCTACAGTG TGTCACCACC CATATTCCGG TGGGGCTGCT TACTTGTATT
ACGGGGGTCT CCGGTTCGGG TAAATCCTCC TTGGTGTTGG ATACCCTCTA TCCCGCCCTG
GCGCAGCGTC TGCACAATGC ACGGGTGACC AGCGGTCAGT TTACCACCAT TGAAGGGTTA
TCGCAGTTGG ATAAGGTGAT CCACATGGAT CAAAGCCCCA TTGGCCGCAC CCCGCGCTCC
AACCCCGCCA CCTACACCGG GCTATTTACC CCCATCCGCG AACTGATGGC CGCTACCGAA
GAGGCCCGTG CTAGGGGCTA TAAATCGGGA CGCTTCAGCT TTAATGTCAA AGGGGGACGC
TGTGAGGCCT GCGCCGGGGA TGGTCTGGTC AAGATTGAGA TGCACTTTCT CCCCGATATT
TTTGTTCAAT GCGATGTCTG CCACGGTGCC CGCTATAACC GGGAGAGTTT AGAGGTCCAC
TATAAAGGCA AAAACATCGC CGAAATTTTG AACATGACCA TTGAGGAGGC TTTAGCGTTT
TTCCACGCCC ACCACGCCCT GCGCGGTCGC TTGCAAACCT TAATGGATGT GGGGTTAAGC
TATATGCGGT TGGGCCAGTC GGCCACCACC CTTTCGGGGG GAGAGGCGCA GCGGGTCAAG
ATTGCTCGGG AGCTTTCCAA GCGTTCAACC GGCAAAACCC TCTATATCTT GGATGAACCC
ACCACCGGCC TGCACTTTGA TGATATTCGC AAGCTGGTCG AGGTGCTGCA ACGTCTGGTG
GAGGCGGGCA ACACGGTGGT GGTTATTGAG CATAATTTGG ACGTCATCAA GACGGCAGAT
TGGATCATTG ATCTCGGTCC CGAAGGGGGC AGCCATGGAG GACAGATTTT AATCGAGGGC
CAACCCGAAC AGGTGGCGGC CTGCGAGGTC TCCTGGACCG GTCGTTATTT AAAGCCCTTT
TTACAGCGTG AATGCGTTGC CTTAGGGGTA TGA
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| Protein sequence | MSEEKKIIIR GAREHNLKNI HVEIPRNALT VITGVSGSGK SSLAFDTLSA EGQRRYVESL
SAYARQFLSL QNKPDVDAIE GLAPSISIEQ KSTSKNPRST VGTVTEIYDY LRLLYARVGR
PYCYGCGRPI ESQTISQMVD AVMELPERTR LLLLAPIVQG RKGEYKKELL ELQKQGFTRV
VIDGETYDLG ETPTLNKKVK HSIEILVDRL VVKPDIQTRM ADSLETALRL SEGIARVQTV
EDTPQEWLFS EKNACIHCNI SYPEIEPRLF SFNNPFGACP SCDGLGTQEF FDPELIVPNP
SLSLREGAIA PWAKPTQRMA QESLYTLAEH FEINVNLPWQ ALPEPFREIV LFGSGDEKVK
FRWKGFRRAR TVHRPWEGVI HTMERRYLET QSEEQREQYR QYRNATPCTA CQGKRLRKEA
LHVKVGSRNL AEFTALPLRE AQRAIEDLQL TPREHAIAER ILKEVTDRLN FLIAVGLDYL
TLDRTAGTLS GGESQRIRLA NQIGSGLVGV LYILDEPSIG LHQRDNQRLL DTLVRLRDLG
NTVVVVEHDE DAIRTADYVV DMGPGAGEHG GQVVAAGTPA EIMAHPDSLT GHYLNGQQTI
PVPQQRRPVD PKRLITLKEV STHNLQCVTT HIPVGLLTCI TGVSGSGKSS LVLDTLYPAL
AQRLHNARVT SGQFTTIEGL SQLDKVIHMD QSPIGRTPRS NPATYTGLFT PIRELMAATE
EARARGYKSG RFSFNVKGGR CEACAGDGLV KIEMHFLPDI FVQCDVCHGA RYNRESLEVH
YKGKNIAEIL NMTIEEALAF FHAHHALRGR LQTLMDVGLS YMRLGQSATT LSGGEAQRVK
IARELSKRST GKTLYILDEP TTGLHFDDIR KLVEVLQRLV EAGNTVVVIE HNLDVIKTAD
WIIDLGPEGG SHGGQILIEG QPEQVAACEV SWTGRYLKPF LQRECVALGV
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