| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3591 |
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| Symbol | |
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| ID | 4483762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4509416 |
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| End bp | 4510531 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639724340 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_867482 |
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| Protein GI | 117926865 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCATA CCGTCTCCTT GGTGGCCCCT CGTCGTCAAA CTCGGCCTGT GCAGGTGGGT
TCGGTACAGG TGGGTGGGGA TGCCCCCATC TCTGTGCAAT CCATGACCAA TACCGACACC
CGAGATCTGC CGGCGACCCT GGCACAGATC CATGCCATTG CCCAAGCTGG GGCCGATTTG
GTGCGGGTTT CCTGCCCCGA TATGGCCTCG GCAGAAGCGG TAAAGGCGTT GGTGGCGCAG
GCACCGGTGC CCCTGATTGC GGATATCCAT TTTGATCATC GGTTGGCATT AAAGGCGTTG
GCGTGTGGCA TTCATTGTCT ACGTATTAAC CCCGGTAATA TTGGCAGTAC CGCACGGGTG
CAAGAGGTGG TGGCCGCCGC GCGAGAACGT TGTGTGCCCA TTCGTATTGG GGTCAATGCG
GGCTCTTTAG AAAAGCAACT GCTGGAAAAA TATGGCGAGC CCTGTGCCGA AGCCATGGTG
GAGTCGGCTC TGCACCATAT TCATATTTTA GAAGATCTAA ATTACCCCGA AATCAAGGTT
AGCCTAAAGG CCAGCGATGT GGGTATGACG GTAATGGCCT ATCGCCAACT GGCGAGCAAG
GTTAACTACC CACTGCACCT GGGGATAACC GAGGCCGGGG GCATGCGCAG TGGCTCGGTA
AAATCGGCCA TTGGTCTTGG GCTGTTGCTT GCGGAGGGAA TCGGCGATAC CCTGCGGGTC
TCCCTGTCAG CAGATCCGGT GGAGGAGATT AAGGTTGGCT TCGATATCCT TAAATCCTTG
GGGTTGCGCA GTTTGGGTGT CAATATTATC GCCTGCCCCA CCTGTGCCCG ACAAGAATTT
AAGGTTATTG ATGTGGTGGC CGAATTGGAG CGCCGTCTGG CCCATATTCG TGAACCGGTG
ACATTGTCAA TCATCGGCTG TGTGGTCAAT GGCCCCGGTG AGGCCAAAGA GACCATGGTG
GGTGTGGTGG GGGGACAGGG CGAAAACCTG CTCTACCAAC ACGGCCAAAC CATCGGTAAG
CGTGGTGATG CCGAGCTGGT GGAAACGGTG GTGGAGCAGG TAGAAGCCAT CGCCCAACAG
ATGCGGGCAG CCAAAGAGAA AGCAGAAGCG GAATAG
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| Protein sequence | MAHTVSLVAP RRQTRPVQVG SVQVGGDAPI SVQSMTNTDT RDLPATLAQI HAIAQAGADL
VRVSCPDMAS AEAVKALVAQ APVPLIADIH FDHRLALKAL ACGIHCLRIN PGNIGSTARV
QEVVAAARER CVPIRIGVNA GSLEKQLLEK YGEPCAEAMV ESALHHIHIL EDLNYPEIKV
SLKASDVGMT VMAYRQLASK VNYPLHLGIT EAGGMRSGSV KSAIGLGLLL AEGIGDTLRV
SLSADPVEEI KVGFDILKSL GLRSLGVNII ACPTCARQEF KVIDVVAELE RRLAHIREPV
TLSIIGCVVN GPGEAKETMV GVVGGQGENL LYQHGQTIGK RGDAELVETV VEQVEAIAQQ
MRAAKEKAEA E
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