| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3582 |
|---|
| Symbol | |
|---|
| ID | 4483753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4500206 |
|---|
| End bp | 4501114 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639724331 |
|---|
| Product | MCP methyltransferase, CheR-type |
|---|
| Protein accession | YP_867473 |
|---|
| Protein GI | 117926856 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATCA CTCCCGAAGA GTTTACAAAA ATCTGCCAGT TCATCCACGA GCACAGTGGG
ATTCTCATTG GTGCCGGTAA GGAGTATCTG GTGGAAAATC GTCTCACTGT TTTGATGGTT
CAAAACGGGT GTGAAAACTT TATGCAGTTG CACGACAAAC TGCTAAAGGA TACGGGCATG
TTGCGCACCA AGGTCATTGA TGCCATGACC ACCAATGAGA CACTTTGGTT TCGCGACACC
TCGTTTTTCA CAGCACTCTC GGACTTTGTC GTTCCGGAAC TGATCAAAAA AGCGAAAACA
CAGCCCAAGG TACGCATCTG GTCTGCGGCG GCCTCTACGG GGCAGGAGGC CTACTCGGTG
ACAATGCTCA TCGACCAAGG CTTAAAAAAG ATGGGAATTG GGGCACCTTC CCTGGATAAA
TTCCAGGTGG TTGGTACAGA TATTTCGCCC TCTTCGATCT TCATTGCCAA GGCGGGTCGT
TACAGCCAGT TGGCGATTTC ACGGGGCATG AAACCGGAAT TTCTCGAAAC CTATTTCGAG
AAAAAAGGGA TGGCCTATGA AATCAAACCC GAATTGCGTA AGCTCATTGA GTTTAAGCAG
TACAATCTAA AAGACAGCTA CACCTCACTT GGACAGTTTG ATTTTGTGCT TTGCCGCAAC
GTTCTTATCT ATTTTTCTGA CGAGTTGAAG CGGGATATTT ACGGCAAAAT TCACGGTGTT
ATGTCCCCCA CAGCCTACCT TGCTATTGGC GCCTCAGAAT CACCAAGGGG TTATACCAAT
GCCTTTGAGC AGGTGATGGT GGGGGGGGCC GCCTTGTTTA AGCCATCGGC AGGGGGTGCG
GCTCGGCCGT TGCCTGGGGC ACGTACTGCG GCGGTACGTC CTATGCCATC TAGTCTTCAG
CAACGTTAG
|
|---|
| Protein sequence | MAITPEEFTK ICQFIHEHSG ILIGAGKEYL VENRLTVLMV QNGCENFMQL HDKLLKDTGM
LRTKVIDAMT TNETLWFRDT SFFTALSDFV VPELIKKAKT QPKVRIWSAA ASTGQEAYSV
TMLIDQGLKK MGIGAPSLDK FQVVGTDISP SSIFIAKAGR YSQLAISRGM KPEFLETYFE
KKGMAYEIKP ELRKLIEFKQ YNLKDSYTSL GQFDFVLCRN VLIYFSDELK RDIYGKIHGV
MSPTAYLAIG ASESPRGYTN AFEQVMVGGA ALFKPSAGGA ARPLPGARTA AVRPMPSSLQ
QR
|
|---|
| |