Gene Mmc1_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3572 
Symbol 
ID4482088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4483802 
End bp4484905 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content53% 
IMG OID639724321 
Productflagellar hook-length control protein 
Protein accessionYP_867463 
Protein GI117926846 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.949278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAT TCGCCATGCA GCTCGCCTCC TTGGGTCCCG TCTCTGGTGT GGAGTCAAAA 
CCCACTGGAG CGGAACAGGC CAGCGCCGTC AATGAAGATG GCCAAAGCTT TGCCGATACT
CTCAACCAAG TGGGCCAGCA GCAACAAGCC CAAGAGAACG CAGAGAAACA AGACCTGTCC
AAGGACGAGA AGCAGCCCTC CGCCCATGCC ATGCGTAAGG AACACGAAAC GGTCAGGCGG
AAAAATGGGT CAGATGCGCA TAAGGACGTG CAAGGTGGGG AACAAGTCCC GCTTCAACAA
ACCCAGATGG AATCTAAAGC TCAGGTACAA AAGGGAGAAG TGAAGGGGCA ACGGGTTGCG
GTCAATGGTG ACGGTAAGCC GGTCAATCAG GGGGAAATGC CCCGCGTATC GCCCAATGGT
GAGCCGCAGT TGGGGCAAAA TATTCCTGGT GTAGAGCTGC AAGTTGGCGG GCAAGAGGCA
CAGTTTGGTC GTATGCTTGA ACAGATGCAG CTCCATGCTG ATGAAAAAAC AGTAAAAAGT
GTTGAAAAAC TGGATTTGCA AGTCAAAGAG GGCCTTGCCC AAATCAAGGG TGAGCAGGGG
GGATCGAGCA AAGCGATGCG CGCGGTGGCG CAATCACCCA TACGGGCACA AACTCCCCAG
TTTGGGGATG AGTTGGGTAA TCGCATTGGC CGTATGAAGC TTATCTCCAA ACCTGGCGAG
CAGGAGCAGA TACGATTGCG CTTGGAGCCT CGTGAGTTGG GTTCCTTGGA TGTGAAATTG
CAGATTGATG CTGATAACAG GGTGCATTTG ACCATTACCG CCGAGTCAGA AGCCGCTAAA
GAGGCCATCA ATCGCAACAT GTCGCAACTG CGAGAGGCAT TGGCAAGACA GGAGTTGGGT
TTTGCGGAAG TCAATGTCGA AGTAGGTCAG CATGACTTTG CGGATGCCCG TTCCGATGCG
GGTTTTAAGG ATGCATCTGA GCAGGGTAAA GAGGGTTCTG AGGAGCGCTC GCCCTGGCAA
AAAGAGTGGG ATTTGGTGGA GCAGATTATT CAATCTGGGC AGATACGAGG CCCAGGATTG
GGCGGGTTAA GCGTTATTGC TTAA
 
Protein sequence
MSAFAMQLAS LGPVSGVESK PTGAEQASAV NEDGQSFADT LNQVGQQQQA QENAEKQDLS 
KDEKQPSAHA MRKEHETVRR KNGSDAHKDV QGGEQVPLQQ TQMESKAQVQ KGEVKGQRVA
VNGDGKPVNQ GEMPRVSPNG EPQLGQNIPG VELQVGGQEA QFGRMLEQMQ LHADEKTVKS
VEKLDLQVKE GLAQIKGEQG GSSKAMRAVA QSPIRAQTPQ FGDELGNRIG RMKLISKPGE
QEQIRLRLEP RELGSLDVKL QIDADNRVHL TITAESEAAK EAINRNMSQL REALARQELG
FAEVNVEVGQ HDFADARSDA GFKDASEQGK EGSEERSPWQ KEWDLVEQII QSGQIRGPGL
GGLSVIA