| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3560 |
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| Symbol | |
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| ID | 4482076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4471636 |
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| End bp | 4473723 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639724309 |
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| Product | TonB-dependent copper receptor |
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| Protein accession | YP_867451 |
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| Protein GI | 117926834 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGC GTTCTCATCT GGCTATGCTC TCCGCCCTTC TCGCCCTTCC CATCACCTCG
GTACAGGCCC AGCAGAGCAC CACCCTGGCC CCATTGACCG TGGAAGATAC CCTGTTGGAG
GAGGATGGCG CGGTTATTCT CTATATGGAT AACCGCAACA AGGGTCCGGT AGCCGATGGC
GGCGAGTTAT TAAAAACCAT TCCGGGCGTT TCAGCAGCCC GTAAGGGGGG GCATGGTTTG
GATCCCTCCA TTCGGGGACA AAACCAGACC CGTTTGAACA TTGTGCTGGA TGGTGCCTTT
GTGCATGGGG GCTGTCCCAA CCGTATGGAT CCGCCCTCGG CCTATGGAGC TTCGGAGAGC
TATAATTCTG TTACCGTGCT CAAAGGGGCG CAGAGTGTCG AGTATGGCGC GGGGGGCAGT
GGGGGCGTGG TGCTGTTTAA TCGCCAAACC GAAACCTTTG ATGCCGACGA GCGCTATCGG
GGCAAAGCAG GGGTAGGTTA TCGGGGTAAT ATTAACGCCC TAGAGAGCTA TCTGGATATG
GCCAGCGGCA CCCCCAGTGC TTTTATTCGC TTTATTGGTA ACTATAGTGA TGGTAACGAC
TATAAAGATG GCGATAACAA TGTGGTACGC AGCTCTTACA CCGAAAGTAC CGGTAATCTG
CTGCTGGGTT GGACCCCCGA TGCCGAAAAC CGTGTAGAGC TTTCCCACGA AGCCAGCTAT
TCCAGTGATA TGCTCTATGC CGGGGCCGGT ATGGACGCCC CCTATACCCG TAATAATGTG
ACCCGCTTCA AGTTTGCCCG TGGCCTGCAC GACGGGGTGA TGCAAAAGTT GGAGGGGCAG
ATCTCCTACT CGCAAGTCGC GCATTTAATG GATAACTACA GCCTGCGCAC CGCACCCGCT
GCGGCCATGT ATATGCAAGC TCCCTCAACC TCTGACACCT TAACGGGCAA ACTGAGCCTA
CAGTTTAACC ATGCGGGCAT GGATTGGAAG GTTGGGGTGG ACCATCAAGG CAACCAGCGG
GATGCCGTAC GTTACCGGGG CACCGTTGGA GCGGTGACAA ATCTGCAATC CTATCTCTGG
CCCGATGTGA CCACCCTCAC CACGGGGCTG TTTGCGCAGC TCGACCGCCC CCTAGGGGAA
ACCAACCGCC TCAAGGCTGG GCTACGCTAC GATTATGTGC GTGCCGATGC AGGCAAAACC
CATGCTACCC CCAACGATGC CATGGGGGCG TTGGCCAAGT TGAGTGGGCA TGACCTCTAC
ACCACTTATT ATGGGGGGTC AACAGACGCC AGTACAGAGC ACAATATGGG TGGTTTTTTA
CGCTATGAGC AGGGCTATTG GGGAAACCAA GGCAACTTTT ATGTGGCGCT CAGCCGGACG
GTGCGCACCG CCGATGCCAC CGAGCGTTAT ATGGCAGCCA ACCATAATAC CAGCGCAGAC
AGTCGCTGGG TGGGGAACCC CTTTATCAAA CCGGAAAAAC ACCACCAGTT GGATGTGGGT
ACCCGTATTC AATGGCAAGC GCTCAAGAGT GATGTCACTC TTTTTTATAA CCGGGTTGAC
GACTATATAT TGCAAGACCA CCAGCATAGC GCCGGGGCCG ATGGCAATGC CACCGTCTAC
CACAACGTGG AAGCAACCCT GCTGGGCGGT GAAGCGGCCT TTACCTACAA CTTTGATCCC
CATTGGGTGG GGGGCATGAG CTTGGCTTAT GTTTATGGTC ACAATGAGAC CAGCAACCAG
GTTTTGGCCC AGATTGCCCC CTTTGAGGCC GGCTTTACCC TGGATTATCG GGCAGACAGG
TGGGATTTTG GCGGCAAATT AAGGGTCGTG ACCAAGCAGA CCCGCGCCGA TACCGACAGC
ACCACGGCTA CCGGTCTGGA TACGGACCAA ACCCCCGGTT TTTCCACGCT GGATCTCTAC
AGTGCCTACC GGCCCATGCC CAACCTGACC CTCAAAATGG GTGTGAACAA TCTGTTTGAT
AAGCGTTATG CCGAACACCT TAATGCAAGC AACAGCTTTG ATGCCACACA GTTGCAGGTG
AACGAGCCGG GCCGCACCCT ATGGTTTACC CTGGGTACTG AGTTTTAA
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| Protein sequence | MKARSHLAML SALLALPITS VQAQQSTTLA PLTVEDTLLE EDGAVILYMD NRNKGPVADG
GELLKTIPGV SAARKGGHGL DPSIRGQNQT RLNIVLDGAF VHGGCPNRMD PPSAYGASES
YNSVTVLKGA QSVEYGAGGS GGVVLFNRQT ETFDADERYR GKAGVGYRGN INALESYLDM
ASGTPSAFIR FIGNYSDGND YKDGDNNVVR SSYTESTGNL LLGWTPDAEN RVELSHEASY
SSDMLYAGAG MDAPYTRNNV TRFKFARGLH DGVMQKLEGQ ISYSQVAHLM DNYSLRTAPA
AAMYMQAPST SDTLTGKLSL QFNHAGMDWK VGVDHQGNQR DAVRYRGTVG AVTNLQSYLW
PDVTTLTTGL FAQLDRPLGE TNRLKAGLRY DYVRADAGKT HATPNDAMGA LAKLSGHDLY
TTYYGGSTDA STEHNMGGFL RYEQGYWGNQ GNFYVALSRT VRTADATERY MAANHNTSAD
SRWVGNPFIK PEKHHQLDVG TRIQWQALKS DVTLFYNRVD DYILQDHQHS AGADGNATVY
HNVEATLLGG EAAFTYNFDP HWVGGMSLAY VYGHNETSNQ VLAQIAPFEA GFTLDYRADR
WDFGGKLRVV TKQTRADTDS TTATGLDTDQ TPGFSTLDLY SAYRPMPNLT LKMGVNNLFD
KRYAEHLNAS NSFDATQLQV NEPGRTLWFT LGTEF
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