Gene Mmc1_3559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3559 
Symbol 
ID4482514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4470209 
End bp4471270 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content54% 
IMG OID639724308 
Producthypothetical protein 
Protein accessionYP_867450 
Protein GI117926833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCT ATCAAAGGTG GATGCGGCGT CTGATCGACT ATTTGATGGA GGAACGTGCA 
CCCGAGGGTT TGCCGGTCTG CAATTTTCAG CGTATACGCA CCGAGTTGAT ACCGGGTGAT
GTCATATTGG TCGAGGGACG TAGCCGCATT GCAGAGGTTA TCAAGACCAT TACCCAAAGC
ACATGGTCCC ATGCGGCCCT ATTTGTCGGG CGATTAAATG ATATAAGGGA TGCCGCTTTG
CGTCGTCAAG TGGCCGCGCA CTATGAAGGC GAGCTAGACG AGCCACTGCT GATTGAGGCG
CTGTTGGGTA AAGGTACGGT GGTGACACCC TTGCAAGCCT ACCGGGATGA CCATTTACGC
ATCTGTCGCC CCCATGGTTT GAGTGATCGA GATCGGGATC GTGTGGTGTT GTACGCGATT
GCCCGTTTAG GGTTTGATTA TGATATAAGG CAAGTTCTTG ATCTAGGCCG ATTTTTATTG
CCTTACAGCA TTATACCCCG GCGTTGGCAC TCATCCCTGT TTGTGCACAA TGCGGGGGAG
GTTGCTACTA CCGTTTGTTC CACCATGTTG GCCGATGCCT TTGGTTCGGT GGACTATCCC
ATTCTGCCGA TCATCAAGCG GGATGCGCAG GGTAATCTTA AACTGTTTCG GCGTAACACA
CGTTTGACCA TGCCCCGGGA TTTTGACCAT TCTCCCTATT TTTGGGTGGT TAAATATCCC
CTGTTGGGTG AGGCCGATGG CTACCGCACT CTGCCGTGGG ATACGGAAGG GTGGATCTGT
AATGGAGCCC GTGAGTGTTA TCCGCCGGGT ACGGAAATTT TAACCCAGGA GCAGGCTTGG
CGGCCTGCAC ACTGGGCCGA GGGGCAGATG CGTAGTTGGT GGCAAGAGAC CCTCTTACAC
CTGCCCTATA TGGAGCGCCC ACCATGGTTG GCGCTGCATT GGGATGACAA CGATGAGGGC
GGTTGGAGCC GTGTTCTGCA CTGGCTACAC CGCACCCAAC ATCAGCTACG GGATTCGGTG
CAGGGTCAGC GTGGCGGTAA GGAGAAGCAG AGCGTCAAAT AG
 
Protein sequence
MTIYQRWMRR LIDYLMEERA PEGLPVCNFQ RIRTELIPGD VILVEGRSRI AEVIKTITQS 
TWSHAALFVG RLNDIRDAAL RRQVAAHYEG ELDEPLLIEA LLGKGTVVTP LQAYRDDHLR
ICRPHGLSDR DRDRVVLYAI ARLGFDYDIR QVLDLGRFLL PYSIIPRRWH SSLFVHNAGE
VATTVCSTML ADAFGSVDYP ILPIIKRDAQ GNLKLFRRNT RLTMPRDFDH SPYFWVVKYP
LLGEADGYRT LPWDTEGWIC NGARECYPPG TEILTQEQAW RPAHWAEGQM RSWWQETLLH
LPYMERPPWL ALHWDDNDEG GWSRVLHWLH RTQHQLRDSV QGQRGGKEKQ SVK