| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3551 |
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| Symbol | |
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| ID | 4482506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4458137 |
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| End bp | 4459015 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724300 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_867442 |
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| Protein GI | 117926825 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000115044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA TTGGATTCAT AGGACTTGGT ATTATGGGCT CTGCCATGGC CAACAGCTGC
CACCATGCAG GATACCAATT ATGTGTATAT AACCGAGGGC ATGCTCGACT AAAACCCTTT
ATTGATCGGT CGATCCCCAC CGCAGCAACA CCCCAAGCAT TGGCCACCCA GAGCGATTAT
ATGGTGATTA TGGTCAGCGA CCCAGCCGCC TTGCTCGAAG TGCTGCAAGG TCCCGTCGGT
GTATGTTCGG CGGATTTAAC CGGCAAGGTG GTGATTAACG CCAGTACCGT CTCGGTGGAA
GCCAGTCAGC AGGCGGCCAC TCTGGTGGAA CAGGTAGGCG GCGCTTTTCT TGACGCGCCT
GTTTCTGGCA GTAAAATACC GGCACAAACA GGTAAATTGG TCTTTCTGGC GGGCGGGCAT
CACGCTGTCA TACAGCGCTG CGAGCCCCTG TTGTTAAGCA TGGGCAGTGC CGTGATCCCG
TGTGGCGCGG TGGGGGATGG CACCCGCATG AAACTGGCCA TGAATCTGTT AATGTCCGGC
ATGGTGCAAG CCCTGGCCGA AAGCCTGCTG TTGGTGCGCA ACAGTGGCCT AGAGGATCAA
CTGTTCATGG ATGCCATTAA AAATAGTGTG CTGTTCGCCC CCATCCTAGG TATGAAGGGG
CAGGCCTTTT TAAACCGCGA TTTTGAGCCC CACTTTCCCC TCCATCTTCT CTATAAGGAT
CTTAATTTAA TCCATGCGCA AGCCCTTGAG CACCATGTCG CCCTGCCTGC GGGGGATGCC
ATACGTCAAG GTTATGCCCA AGCCATGCAG CAGGGCCTGG GTGGTCTGGA TATTGCTGCA
ATCTTACAGG TGCTGGAAAA AGGCATCGAC ACCCCATAA
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| Protein sequence | MQKIGFIGLG IMGSAMANSC HHAGYQLCVY NRGHARLKPF IDRSIPTAAT PQALATQSDY
MVIMVSDPAA LLEVLQGPVG VCSADLTGKV VINASTVSVE ASQQAATLVE QVGGAFLDAP
VSGSKIPAQT GKLVFLAGGH HAVIQRCEPL LLSMGSAVIP CGAVGDGTRM KLAMNLLMSG
MVQALAESLL LVRNSGLEDQ LFMDAIKNSV LFAPILGMKG QAFLNRDFEP HFPLHLLYKD
LNLIHAQALE HHVALPAGDA IRQGYAQAMQ QGLGGLDIAA ILQVLEKGID TP
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