Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3550 |
Symbol | |
ID | 4482505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4456921 |
End bp | 4457628 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639724299 |
Product | phage lambda repressor protein. Serine peptidase. MEROPS family S24 |
Protein accession | YP_867441 |
Protein GI | 117926824 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000497465 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG ATCTACATGG GGAGTCTGAC TACTCTTCAT TAGCAGACCC AAGTAAGACA GTGGGGGAAT TTAACACCCT AGGTGAGCGG TTGCGTATGG CGCTGGACCA TGTTGGTATG TCCCAATCGG AGTTGGCGCG GCGGGTGGGC ATTCGCCCCC AGACGGTACA ACATGTCTGT GCGGGCCATA CCCGACGATC CGGATATACA GCGGAATTTG CCCAGGTTTT AGGGGTACGA CCCGAGTGGT TAGCCATTGG TCACGGTTCA CTGCGTGAAT TTGCCAACGA ACAAAACAGC GGTGCTGTAC GTAGGCTGCC CATGCTCAAC TGGTCGAATG TGATCCACTG GAGCCAGTCT GGCTATCAGG CACAGCAAAT GGGCGAGGTT TATGATCTGG TGGAAGTTAC CAAACCCTTT GGTAACCACG CTTTTGCCCT GAAGGTGGGT GGGGATTCCA TGGAACCCAA GGTTCCAGAG GGTTCCACGA TTTTGGTGGA CCCTGCCTAC GTGGCACAAA ACAACTATCT GGTTATTGCG CACCTCGAGG GTGAACCCGA AGCGACCTTT AAACAGCTGG TACTTGAGGG TGGTGGGCGC TATCTAAAAC CGCTCAATCC TCGTTATCCC ATCGTGGATC TCTCCCGTTA TCGTTACACC CTGCTGGGTG TGGTGCGTCA AGTTGTGATC GACCTCGATC CTCTGTAA
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Protein sequence | MKKDLHGESD YSSLADPSKT VGEFNTLGER LRMALDHVGM SQSELARRVG IRPQTVQHVC AGHTRRSGYT AEFAQVLGVR PEWLAIGHGS LREFANEQNS GAVRRLPMLN WSNVIHWSQS GYQAQQMGEV YDLVEVTKPF GNHAFALKVG GDSMEPKVPE GSTILVDPAY VAQNNYLVIA HLEGEPEATF KQLVLEGGGR YLKPLNPRYP IVDLSRYRYT LLGVVRQVVI DLDPL
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