Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3540 |
Symbol | |
ID | 4480391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4442113 |
End bp | 4445574 |
Gene Length | 3462 bp |
Protein Length | 1153 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639724289 |
Product | hypothetical protein |
Protein accession | YP_867431 |
Protein GI | 117926814 |
COG category | [S] Function unknown |
COG ID | [COG4717] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.678932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCA ACCATCTCAC CCTCTCCCGC TATGGTCATT TTACCGATCG CCACCTGCCC CTTGGCCACC CCTCAAACCT TACCTTGCTG GTGGGCGCTA ACGAAGCCGG TAAATCCACC ACCCTGCATA GCATTCTTGA CCTATTGTTT GGTATTGAGC CCCGTTCCAG CTATAATTTT CTACATAACT ATCATGATAT GCGTTTAGAG GCCGAACTTG ACCACCAAGG TCAAAGACAC CTTATAAAAC GGCACAAAGG CAATAAAAAC ACCCTGCGCG GCGCCAACGA CCAACCCTTG CCCGAACATT TATTAACCGA CATGTTGGCC GGTATGCAAC GCGCAACCTA CCAAAACCTG TTTGCCCTCA ATCATGAGCA ACTGCGCCTT GGTGGTAACA AGATGACCCT CGCCGAAGGG GATTTAGGCG AGCTGCTGTT TGGGGCCTCT GGCGCACTGC AAGGGGCCGG CAGCATTAAA ACCCAACTGA ATAAAGAGGT GGAGCGCTGG CACGGCCTTA ACAAGCGCAG CGGCCCCATG GTCGACGCCA CCAACCGGTT AAAGACGGCC CAAACCGAGC TGCACGCCAT TACCGTCACC GATCATCAGT GGCAACAGTG TCAAGCCGCG TTTGAACAGG CCAAAAATCA CCATCAACAG GTCAACCAAA GCTATAAAAC CCAGCTCAAA CAGCTCGCCG AGCTGCAACG CCTCAAGCAG CTCATCCCCC ATCTGCTTGA GCTGCAACAG TTGGAAAACC AACGCACCCC GCTGCTGCAC GAACCCCGCC TGGATGCCAA CCTGCAACAA CAATGGCAGA CCCTAGAAGG GCGTTGGATG ACCCTGCAAG GCGAGCTTGA TCGCATCCAC ACCCTCCAAC ACAGTACCCA ACAGCGGCTG GATGAGCTGC CCGCTGCGGT TAACTGGTTA CACCGAGAGC AAGAACTTAC CCTGTTGGAA GAGAGCCGCA CCCAGGTGCT GGGCGACCAA CACCGCACCC CCAAGCTCAA CCAGGAGATC CAACAGCTGG ATGACCAAAT CCGCACCCTG GCCATTCAGC TCGGCAAATC CCCCAACAGC GATTGGCGTA CCCTGCAACA GCAGCAACCC ACCACCCTCC AGATTCAACG CCTCAACGAA GCCATGGCCA GCCATGCCCG ATGGGAACAG AGCTATCAAC AGAGCCACTC CCAACAACTC ACCATCCAGC AGCGGGTCAA AGCGCTAGAG GCACAACAGA CCACTCAGGC CCTTTCGCCC CTACACCTGG AACAGCTTAA AACCGCCCTT GCGCAATTGG GCAATCACGC CCCCTTGCAC CACTATAACC AGTGCCAGGA ACGCCAAGTT GAGCAGCAGA AAAAGCTCGC CCTCAGCCTT GCCCAACTGC CCTGCTGGAA TGGGGATCTA ACCGCCCTAC AACAGCTTAT TATTCCCGCT CAAAGCCTGC TCCAGTCCCA CACGGAACAG TTTCAACTGC TGCAAAAAAA AGAGGCTCAG CACCAACAAC ACAGCGAGCA TCTCCAACAG CGTATGACCC AGCTACAAAA CCAGTTACAC ACCTTGCAAC AGCAGGGTGA TCTGCCTACG CCTGAGCGTA TTCAGCAGCT ACGCCAACAG CGCGATACCC TCTGGCAGCA GCTCTTGCAC CATTGGTCTG ACACATCCCC CCAGCAACAA CACAACTATG CGGCCCTGGT CCAGCAAGCC GATCAACTGG CCGATGCCCG GGATCACCAC GGTCAGCAGA TTCACGCCCT GCAAAAGGCC CAAACCGAGG TGCAACACCA ACAACAGTTG CTCCATAACC ATCAACAACA GGGGCACGCG CTGCACCAGC AACAGCAGCA GTGGTGGCAA CAATGGCGCA AGCTTTGGCC CACCAGCCTG CACGGGCTAG AGCCCCAAGC CATGCAGCGT TGGCTGGAGC AACGCCAAAC CGTTTTACAA AACCAGTGCG ATCTACACGC CCTGCAAACC CAGTTTGGCA TAGCCCAACA GCAGCTTGCT GAAGCCTGCA CGACCCTGCG CCAAACCCTG CACCCCTGGC CCCAACCCGG CGATGACAGC GCCCCCTTTG CCACCCTCTT TGGCCGGGTC GAAGCAACCC ATAGCTGGGC CCAAAAAGAG CTGGCGAAAC AAGAGGCCGC CCAAAACCAC CTGCTTGAAG CAAAACAGCA GATGGCCCAA CTACAAAGCC AATTACAAGC GTTACAAAAA GCGCAAGAGC AGTGGCAAAA ACCCTGGCAG GCTACCCTAA CAGAGCTGCA ACTTTCCCCC CTGTTACAGC CCAGTGAAGT TGTTAACCTA CTTAACCAAT GGCAGTTATT GACTCAATTG CTGCAACAAC GCAGCCACAT GGACCACGAA GCCGCCGCCA TAAACCAACG TGAAACGCTC TTTAATGAAC AGGCCGATAC CCTGTTAAGC GAAGTAGGCT GGGCTCCCCA ACATCCAGAG CAACGTATGC AGGCCGTCGC CGTCTGGAAA GAGGCCTTTA CCCAGGCCCG TAGTGTGGAA AAACAGCGCC ACGCTTGGCA GCAAGAGCTG GCCGAGCAGC AGCAACGCCA TCAGCAGTTA CAAGCCGACC ACGCCGATCT TGCCGCCCAG CGGGCTGCCC TGCTGCATCA CTGTCAAGTG GGGGATGCCA GCCAAATGGC GGAGCGTTTC GAGCGAGCCC GACAGCGGCG TGAGCTCGAT CAGCAGTGGC AACAGAAACA ACAGCAGGTC TTGGCGGTTG CCGAAGGTTG GAGTGTGGAC GAAGCGAAAG CTGCCGTCAC CGATCTGGAT TTGGAGGAGA TTCAACAGCA GATTCACCAC ACCGAGCAAA GCTTAGCCGA CTGGCAGAAC CGCCAAGAGC AGGCCAACCA AGCGTTGACC GCCGCTGCCC AGCGTATGGA GGAGCTTAAA CGGGGTGATC CCGTGCAGTT GGCCCAAGCG TTGGCCGATG CCGAAGCGGA GTTGACCCAC GTAACCCGTC AATGGATGGC GGCTTTTGTG GCCGAACAGC TTTTTCAAAC CGCCCTGGAA CAGTTTTCCC TCACCAACCA AGGACCGGTT TTAAAGGCTG CTCGCCACCA CTTTAGCCAA CTGACCAACG GGCGCTATCC AGATCTGGTC ATCGACTATG CCAGCGGTAC AAATCCCACT CTCATGGTCA AAAAGCGCTG TGGGGGCACC CTCATCATCG ACGCCCTAAG TGAAGGTACC AAAGATCAAC TCTACCTAGC TCTACGCTTG GCTGCGGTAG AGCACCATGT GGATCAGTTG GGTTATGGTC TACCCTTTAT CGCCGATGAT CTGTTTGTTA ATTTTGACGA TACGCGCACC ATGGCGGGAC TGCAAACCTT GGCGCAGCTT AGTAAAAAGA CCCAAGTGCT GATTTTCACC CACCATCCCC ACCTGGTCGC TCTGGCTCAA GCGCAGTTGG GGACGCAGCT GCATGTGGTG CAGCTCAGTT AA
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Protein sequence | MRINHLTLSR YGHFTDRHLP LGHPSNLTLL VGANEAGKST TLHSILDLLF GIEPRSSYNF LHNYHDMRLE AELDHQGQRH LIKRHKGNKN TLRGANDQPL PEHLLTDMLA GMQRATYQNL FALNHEQLRL GGNKMTLAEG DLGELLFGAS GALQGAGSIK TQLNKEVERW HGLNKRSGPM VDATNRLKTA QTELHAITVT DHQWQQCQAA FEQAKNHHQQ VNQSYKTQLK QLAELQRLKQ LIPHLLELQQ LENQRTPLLH EPRLDANLQQ QWQTLEGRWM TLQGELDRIH TLQHSTQQRL DELPAAVNWL HREQELTLLE ESRTQVLGDQ HRTPKLNQEI QQLDDQIRTL AIQLGKSPNS DWRTLQQQQP TTLQIQRLNE AMASHARWEQ SYQQSHSQQL TIQQRVKALE AQQTTQALSP LHLEQLKTAL AQLGNHAPLH HYNQCQERQV EQQKKLALSL AQLPCWNGDL TALQQLIIPA QSLLQSHTEQ FQLLQKKEAQ HQQHSEHLQQ RMTQLQNQLH TLQQQGDLPT PERIQQLRQQ RDTLWQQLLH HWSDTSPQQQ HNYAALVQQA DQLADARDHH GQQIHALQKA QTEVQHQQQL LHNHQQQGHA LHQQQQQWWQ QWRKLWPTSL HGLEPQAMQR WLEQRQTVLQ NQCDLHALQT QFGIAQQQLA EACTTLRQTL HPWPQPGDDS APFATLFGRV EATHSWAQKE LAKQEAAQNH LLEAKQQMAQ LQSQLQALQK AQEQWQKPWQ ATLTELQLSP LLQPSEVVNL LNQWQLLTQL LQQRSHMDHE AAAINQRETL FNEQADTLLS EVGWAPQHPE QRMQAVAVWK EAFTQARSVE KQRHAWQQEL AEQQQRHQQL QADHADLAAQ RAALLHHCQV GDASQMAERF ERARQRRELD QQWQQKQQQV LAVAEGWSVD EAKAAVTDLD LEEIQQQIHH TEQSLADWQN RQEQANQALT AAAQRMEELK RGDPVQLAQA LADAEAELTH VTRQWMAAFV AEQLFQTALE QFSLTNQGPV LKAARHHFSQ LTNGRYPDLV IDYASGTNPT LMVKKRCGGT LIIDALSEGT KDQLYLALRL AAVEHHVDQL GYGLPFIADD LFVNFDDTRT MAGLQTLAQL SKKTQVLIFT HHPHLVALAQ AQLGTQLHVV QLS
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