| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3532 |
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| Symbol | |
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| ID | 4480383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4427110 |
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| End bp | 4430925 |
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| Gene Length | 3816 bp |
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| Protein Length | 1271 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724281 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_867423 |
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| Protein GI | 117926806 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCT GGAGCCTACT GGTTTTAAGC TCGTTGCTGT GGAACCTATC CGTACAAACC
GCCCATCAAC AACAACAACT GCTTGAGCGT AATCGCCACA CCTTTCAGTT GATCCAATTC
ACCCGCCAGT GGAACGCCCA ACATGGTGGT GTTTATGCCC GTGTGACCGC AGAAACCCAG
CCCAACCCCT TTTTAAAAAA CCTCCCCCAA CGCGATCTAA CCAGCACGGA TGGGGTGGCA
CTCACCCTGA TCAATCCGGC CTATATGACC CGTCAAATTG CCGAACTGGC GCGGCACTCA
GGCATGCTGT TTCACATCAC CAGCCTTAAA CCACTCCGTC CCGCCAACCG CCCAGACAAC
TGGGAAGCGG AGGCACTCAA ACGGTTTGAG ACCAACCCCT CCGAACGGCT TGAACGGCTC
GGCCATGGTG ATTCGGCACT CTACCGGTAT ATGGCACCGC TCTATGTGGA ACAATCCTGT
CTAAAATGCC ATGCCACTCA AGGCTATCAA CTGGGGGATA TTCGCGGGGG TATTAGCATC
ACCGTTTCGG CCAAACCGTT GGACGCCGCT CAGGTCGACG TGACGCAAAA ATTGGTGGCA
AGCCATGCGG GCATCTGGCT GCTGATGAGC TTGATATTAG GTTTGGTCTG GCGGCGTCAT
AACCGTTACG TAGAGACCAT CAAGGCCCAT GAGCAACAGT TGGAGACCCG CGTTCAGGAC
CGTACCGATG CCCTTCGTCA AGCCAATGAT CGTCTGGAGC GGGATCGCTC CCAATTGCAG
CAGATTATTG ATGGCGTCAG TGAACCCCTT ATGGTGATCC GCACCGACTA TCGCATTGTG
CTCATGAACG AAGCGGCTCG CAGCTATAAC CCTGAGTTAG CCACCAAACA GGCAAACTGC
TATTGCCATT TGATGACCCA CCAACGCAAT ACCCCTTGTG AAGGCCATGA CCATCCGTGC
CCGTTGGAAC AGGTTGTACG GACGCAACAG CCTTTCAGAA CGGTACACCG CCATATAAAC
CGGGATGGCT TGGCGCGCTT TGTCTCCTTA CAAGCGTCAC CCCTCTTCGA TCAAAACGGG
GCATTGTGGG CGATTATTGA ATCCTCTCGG GACATTACAG AATATATGTC CATGCAGGAG
CAGCTAAAAC AAGAGAGCGA TACTTCCAAC GCCATTATTG ACGCCCTTAG CGGGCTATTT
ATCCTTTTGG ATGCGGATGG TTGCCTCGTC CGCTGGAACA GCAATTTAGC GAAAATGACC
GGCTTAGACG AGCAGAGCTT TGCGGGACGC TCGATCTTGG ATTTTGTGGC ACCCACCAGC
CGCAATGCCT TTATCGAAGC CATGGAAAAA GTGCTTACTG AAGGATTAGC CACACAAGAA
AGCTACCTGC AAACCATGGG TAGGCAACAG ATCCCCTTCG CTTTTCAGAT TAACCGTATC
GAGATTGAGG GTAAGCTTTA TTTGAGCGGT ATGGGTGTGG ATATTTCTGA GCAGCTATCT
ATGCGCCATG CGCTGCAAGA GAGCCAAGAT ATCCTGGACC AGGTTCAAAA GGTGGCCCAG
TTAGGCGGCA TTGTCTGGAA ACCTGCCTCT GGTTTCATGC AGTGGTCAGC ACAGGTCTAC
CCCATGTTGG GTTTGCAACC TGGACAACGC AGTCTATCCC TGCGCACCTT ATTACATGGT
CTATCCCGCC ATGCGCGAAA GGGGTTACTC CAACGTCTGG GTGAGTTACG CGATACACGT
CACCACGTTA TCGAGCGTGA GCTGCACCTA TTGGGTTTTG ATGGCATTAA ACGGTATCTC
CACTTGCGTG GCCAACATCG CCAGAGCCAT GATCAAGAGC ACCCACAGAT ATTGATCACA
TTGCAGGATT TAACGCCGCA TAAAATTATT CAACATCAGC TGCAACATCA GCTTACTTTT
CAACAAACCC TGTTAAATAC CATTCCCATA CCGGTATTTT ACAAGGATCG CCAGCTGCGT
TACCAGATCG CCAATGAAGC CTTTAGCAAA TTGCTTAACC AACCCCTAGA AACGCTCATT
GGGCGTACCG TTTATGAGAC CTCACCACTA GAGATGGCAA AAATCTATGA TATAGCTGAC
CATAATTTGC TCGACCATCC CGATAGGGTG CAGCAATATC AGGCTACCAT ACAGCCCCAA
AGCGACAATC CGCATCATGT GGTCTTTTAC AAGGCTGTGG TTCCAGGGGA GCAGGGTCAA
CACGCTGGTA TTGTCGGTGC GATTTTGGAT GTAACCGAAC AGACCCGTGC CCAGAAAGCC
TTGGAGGAAT CAAACCGTCG CTTTGAGACG GTTTTGGGCT CCTTAGAATC CTATCTCTTT
GTGACCAACA TTGAGAGCAA CATGGTCCTT TTTACCAACC ATGCGGCCCG TTTGCGGTTT
GGTGAGACGG TTGGCCAACC GTGTTGGAAA ACCTTTCACT TAGGGTGTAA AGAGGGCGGC
TGTCAGAGTT GTATCCAGGG CGGCGCTTCG ATCCCCCATC ACGGACACCA TTGGGAGTAC
CACAATAAAG AGAGTGGTGA ATGGTACACC ATCCGTATAC GTTTGATTCC CTGGACCGAT
GGGCACTATG TCCGACTGCT GGTTGCCAAC GATATTACGG TACTGAAACA GGCTCAGGAG
GCGAGCCGTC AAGCCATGGA ACAAGCCGAA CGGGCCAACC GAGCCAAGAG TGAATTTTTA
GCCACCATGA GCCATGAGAT TCGTACCCCT ATGAACGTGG TGGTCGGGAT GAGTGATATT
TTGCTGGAAA GTTTGCCCAA TCCTCAAGCG CAAAAACATA TTCAACTTAT TCAAAAGGCG
GGCACCACCC TGCTGGATCT GATCAATGAT ATTTTGGATC TATCGAAGAT TGAAGCGGGG
CAATTGGAGT TGGAACATGC GGTCTTTAAT CCAATATTAT TGATTGAGGA TACCATCGCG
ATTTTCCAAA TGCAGGCCAA ACTAAAAGGG TTAACCCTTA CCAGCAGCAT GACTGGTCAC
ATTCCCCACG CTCTGATGGG GGATCGCGCT CGTTTGCGTC AAATTTTGGT CAATCTCCTG
GGTAACGCCA TTAAGTTTAC CGAAAAAGGA TCGGTTGAAG TCCAGGCGGG TTATGCAAAC
CAGCAGTTTT GGTATGCGGT GGTTGATAGT GGTGTGGGTA TTGGCTCGGA TTCTCTATTG
AGAATCTTTG ATAAGTTTAC CCAGGCCGAT AGCGGTGTAG CGCGGCGCTT TGGCGGAAGT
GGCTTAGGGT TGGCCATTTG CAAAAATTTG ATGGAGCTTA TGGGGGGTAC CATCGAAACC
CAGAGTACGT TGGGTCAAGG CAGCCGTTTT TACTGTGCTA TCCCAGCCCC CATAGCCGAT
CACCTTTTAC CCAGCGACGT CGTGACCAAA GAACCCATCA CGGCGGCTTT GCCTGCATTG
ACCATTCTAT TGGTCGACGA TTCAGAAGAT AACCGCATCC TCGTTCGCAC CTATTTAAAA
CAAAGCCAGC ATAAGCTCGA TGAAGCCGTG GATGGTGCTC AAGCGGTCAA AATGGCCATA
GAAAAACGCT ATCATCTCAT TTTTATGGAT ATTCAAATGC CGATTATGGA TGGCTATCGT
GCCACAGCAG AGATCCGCGC CCACGAGCAA CAGCAGGGTT TGTCTCCCAC GCCCATTTTG
GCTTTGACGG CCCATGCGCT GAGTGCAGAC GTTGAAAAAA GCCTCGCTGC CGGCTGTAAC
GAACACCTGA CCAAACCCAT TCGTAAAAAG GATCTGCTAA GGGTGGTTAA TCATTTCGCC
GCACAGCTAG AGACCGATGA AAACAGCCCT GTTTAG
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| Protein sequence | MSLWSLLVLS SLLWNLSVQT AHQQQQLLER NRHTFQLIQF TRQWNAQHGG VYARVTAETQ
PNPFLKNLPQ RDLTSTDGVA LTLINPAYMT RQIAELARHS GMLFHITSLK PLRPANRPDN
WEAEALKRFE TNPSERLERL GHGDSALYRY MAPLYVEQSC LKCHATQGYQ LGDIRGGISI
TVSAKPLDAA QVDVTQKLVA SHAGIWLLMS LILGLVWRRH NRYVETIKAH EQQLETRVQD
RTDALRQAND RLERDRSQLQ QIIDGVSEPL MVIRTDYRIV LMNEAARSYN PELATKQANC
YCHLMTHQRN TPCEGHDHPC PLEQVVRTQQ PFRTVHRHIN RDGLARFVSL QASPLFDQNG
ALWAIIESSR DITEYMSMQE QLKQESDTSN AIIDALSGLF ILLDADGCLV RWNSNLAKMT
GLDEQSFAGR SILDFVAPTS RNAFIEAMEK VLTEGLATQE SYLQTMGRQQ IPFAFQINRI
EIEGKLYLSG MGVDISEQLS MRHALQESQD ILDQVQKVAQ LGGIVWKPAS GFMQWSAQVY
PMLGLQPGQR SLSLRTLLHG LSRHARKGLL QRLGELRDTR HHVIERELHL LGFDGIKRYL
HLRGQHRQSH DQEHPQILIT LQDLTPHKII QHQLQHQLTF QQTLLNTIPI PVFYKDRQLR
YQIANEAFSK LLNQPLETLI GRTVYETSPL EMAKIYDIAD HNLLDHPDRV QQYQATIQPQ
SDNPHHVVFY KAVVPGEQGQ HAGIVGAILD VTEQTRAQKA LEESNRRFET VLGSLESYLF
VTNIESNMVL FTNHAARLRF GETVGQPCWK TFHLGCKEGG CQSCIQGGAS IPHHGHHWEY
HNKESGEWYT IRIRLIPWTD GHYVRLLVAN DITVLKQAQE ASRQAMEQAE RANRAKSEFL
ATMSHEIRTP MNVVVGMSDI LLESLPNPQA QKHIQLIQKA GTTLLDLIND ILDLSKIEAG
QLELEHAVFN PILLIEDTIA IFQMQAKLKG LTLTSSMTGH IPHALMGDRA RLRQILVNLL
GNAIKFTEKG SVEVQAGYAN QQFWYAVVDS GVGIGSDSLL RIFDKFTQAD SGVARRFGGS
GLGLAICKNL MELMGGTIET QSTLGQGSRF YCAIPAPIAD HLLPSDVVTK EPITAALPAL
TILLVDDSED NRILVRTYLK QSQHKLDEAV DGAQAVKMAI EKRYHLIFMD IQMPIMDGYR
ATAEIRAHEQ QQGLSPTPIL ALTAHALSAD VEKSLAAGCN EHLTKPIRKK DLLRVVNHFA
AQLETDENSP V
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