| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3530 |
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| Symbol | |
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| ID | 4480381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4423448 |
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| End bp | 4425412 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639724279 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_867421 |
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| Protein GI | 117926804 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCTTGT TCAAGGGTTC TTTCCTACGT CTGTTCAAGC AGAACAGTGC TGTTAGAAAT
TTGTTGCTGT TCTGTGTGGT CAGTTTTACC GCCATCCCAT TATTAGAACG ATTTTGGGTC
TTCCCCCAAT TTGTTCAGAG TGTGGTTGAG GATATTGAGC ATGAGGCGCA ATACTTAGGC
AACCTCTTGG CCCAGCCGTT GGTCAAATCC CCCTTGGGTA TCCACAAAAA TCAGCTGCCG
CACTCCTTTT TGGAGCAGCT TACATACTTT AAAAAAGAGT CGCGTTTAGA AAAGGTGAAA
GTGTTCAATG CCCAAGGTGT TGTGGTCTAT TCGAGCGATC CTCAAGATTT AGATCAGGTT
AACAAAAACG ACTACTTTGC CACTCAGGTT GCCAAGGGAA AAATCTTTAC CAAGTTGGTG
CGTCGTAGCT TTCCCAGTAT GGAAGGGCGG CAGCTTAGTA AAGATGTGGT AGAGACCTAT
GTGCCAATCA TGAAATCAGA ACGATTTTTT GGGGCGTTTG AACTCTATTA TGATGTTTCC
TGGCGATTAA AGCAGTTGGA ACAGGTGGTA CGCAGCAGCT CCCTTATCAT GCTCGCGGTG
ATGGCAAGCT TAGCTTTATT GTTGATCGTT CTGCTGTTGC GGGCCACCGG TCAGCTAAGT
CGAGACCAGC AACAACTCGC CCTGCTTACG GCCCGTGAAA ATTTGTTTAC CACAATTGTG
ACAGCGATAC ATGATGCCGT GGTGGTGGTT AACCATCGGG GGGAGATTGT TTTTTGGAAC
CCATCGGCGA GCCGAATTTT TGGCTATAGC GAGAGCGAGG TGTTGGGTCA GCAGGTGCAT
CAACTATTGG CACCACCGCG CTTTCGTGAG CAGGCTGAGC AGGGCTTTGC CCAGTACCAA
AAAAGCGGTA AAGGCCGGAT GGTGGTAGGC CGCACGGTGG AGTTGTTGGG TATGGGTAAG
GGGGGGCATG AGGTCCCTAT AGAGATCTCC GCCAACCATT TTTCCCAGAA TGCACAAAAT
TGGGTGGTGG CCGTTATTCG TGATATCTCT TTGCGCAAGC AGATTGAGCA CACGTTGCAG
CTAAGTTCAA GCATCATGGA AAATTCCAAT GAGGGCATCT TGGTTATAGA TGCCAAGGGT
AAAATTGAAA TGGCCAACCC GGCCATGTAC CAGCTTACCG GGTATGCCAT CGAGGAATTA
TTGGGGCAGT CTACCACCCT TTTTAATTCT GGTCGAAATG ATGCTATGTT TTTCAAACAG
ATGTGGCAAG CCTTGCGCAA GGGGGGGAAC TGGAGCGGGC AAATATGGAG TCGCCATAAA
AGTGGGGAGA TCCTTCCGCA GTGGTTAAGT ATCAGCGGTA TTGAGAACCA ACAAGGAGAA
CGCATCAGCT ATGTTGCCAT CTTGACAAAT ATGGGTCAGC AAATGGCGGC GCAAGATGAG
ATGCAACAAC TAAGTTTTTA TGATGTCTTG TGCGCGTTGC CTAACCAGGT ATTGTTTAAG
GAGCAGTTGC TACAAGGCTT GCGTGAAGCC AGTCGACGGG CGGGTGAGTT GGCGGTGTTA
ATGTTGGATC TGGATCGCTT TAAACAAGTC AATGACAGCT ATGGTGTGGA GATTGGGGAT
CGACTCTTAC AAGAGGTCGC CAAACGGCTA CGCACATTAT TGCGCAGTGA GGATACCGTC
GCGAGGATGG GGGGCGATGA ATTTGCGATT GTGCTGCGGC AGTTGTCCGA AGCGCCGGAG
GATGTGGCGC TGGTGGCACA AAAAATTATT GACGCTTTGA GCATGCCCAT TGCCATCAAT
CCCCAGTGGT GTCAAATAGG GGTTAGTATA GGCATCAGCA TCTATCCCAA ACATGGCGAG
CAGGCTGAAG AGCTGCTCAC CAAGGCGAAC CAAGCCATGC AGATGGCGAA ACAGAGCGGA
CGCAACCATT ACCGCTTTGC CTCCGTCGAT CAAGCCAAGC CATAG
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| Protein sequence | MFLFKGSFLR LFKQNSAVRN LLLFCVVSFT AIPLLERFWV FPQFVQSVVE DIEHEAQYLG
NLLAQPLVKS PLGIHKNQLP HSFLEQLTYF KKESRLEKVK VFNAQGVVVY SSDPQDLDQV
NKNDYFATQV AKGKIFTKLV RRSFPSMEGR QLSKDVVETY VPIMKSERFF GAFELYYDVS
WRLKQLEQVV RSSSLIMLAV MASLALLLIV LLLRATGQLS RDQQQLALLT ARENLFTTIV
TAIHDAVVVV NHRGEIVFWN PSASRIFGYS ESEVLGQQVH QLLAPPRFRE QAEQGFAQYQ
KSGKGRMVVG RTVELLGMGK GGHEVPIEIS ANHFSQNAQN WVVAVIRDIS LRKQIEHTLQ
LSSSIMENSN EGILVIDAKG KIEMANPAMY QLTGYAIEEL LGQSTTLFNS GRNDAMFFKQ
MWQALRKGGN WSGQIWSRHK SGEILPQWLS ISGIENQQGE RISYVAILTN MGQQMAAQDE
MQQLSFYDVL CALPNQVLFK EQLLQGLREA SRRAGELAVL MLDLDRFKQV NDSYGVEIGD
RLLQEVAKRL RTLLRSEDTV ARMGGDEFAI VLRQLSEAPE DVALVAQKII DALSMPIAIN
PQWCQIGVSI GISIYPKHGE QAEELLTKAN QAMQMAKQSG RNHYRFASVD QAKP
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