| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3510 |
|---|
| Symbol | |
|---|
| ID | 4481107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 4383891 |
|---|
| End bp | 4385084 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639724258 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_867401 |
|---|
| Protein GI | 117926784 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG4942] Membrane-bound metallopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTTGACC CGGTGGGGCG GTTATCTGGA CATAGGGCTT GGCTGGTAGG TTGGGTGCTA
CTGGGGGTGG TGCTGTGGAG TGGTGCGGTT TGGGCGCAGG ATGCGTCGGC TGGGCTGAGC
GCCAAACAGG CCAAGCTGGA TGGGATTATC CAACAGCTTA AACAGGAGCA GCTGGCGCTG
GACAAAGCCA AGGGGCAGGA GCGCTCTTTG CTGAGTGAGT TGGAGAGTAT GGAGCGGCGT
CTGACCGATG GTGAACAGCG TCTGGCGGAG ATCCAGCAGG AGGTTCAGCG CATTCGTTTG
ACCCTGCCGG CCTTAGCGGC ACGCATCGAC TCACGCACCA TGGCCATGGC CCGCCAGCAG
CAGCTGTTGG CGGGCCATTT GCGTCTGTTT TATGGCATGG AGGGCAAGGA GGCACTGCGC
ATTTTATCGC CCCAGCGGCA TGCCAAAGCG ACCATGCAGA ACATGGTCTA CTTTCGCTAT
CTTATTGAGG CGCGTAACGC CCGCTTTATG CAGTATAAAA AGAGTGTTGA GGCGTTGCAG
GAGGCCAGCG CGGCGCAACA AACCGCATTG GCGTCGTTGC ATCAGTTGGC CAACAAAGAG
CTGGCGTTGC GTGGGGATTT GCAGCAGCAC CGCACCCAAC GCAGTGAACT GTTAGATCAG
GTCAGGCAAG AGCGTAATCT ACATGCGCGT AAGGTGGTTG AGCTCAAAGA GGCCCATGAG
CGGTTGAGTC AGTTTATGGG TAAGCTCTCC CGGGCCATTG ACAGCGCCCC CCCCGAGCAG
CCCCCCCGCA GCAGGCGTGT TGAGAGCCGC ACCCCGACCT TTAAAAAAAT TGTCCAGGTT
AAAGGGCGCT TGCCTGACCC GGTGGCGGGT AGCGCCGAAG AGTTTGAGCC TGGGCTTTTT
TATGATGTAC CCAAGGGCAG CATGGTGCGG GCGATCCATC GCGCGCAGGT GGTATATGCC
GATTGGTTTC GGGGGTATGG CCAACTGCTG ATTCTTAATC ATGGGGAGAA TGTCTATTCT
CTGTATGGGC ATAATGACCG TTTGTTGGTC GCTCAAGGTG ACTGGGTTGA GGCGGGCGAC
GCCATGGCCG AGGTGGGCAA CAGCGGTGCC CTGGATGGTC GGGTGGGGCT CTATTTTGAG
ATACGCCAAA ATGGTCGCAC CGAAAATGCC CATCGTTGGT TGGCCGCAAA ATAG
|
|---|
| Protein sequence | MLDPVGRLSG HRAWLVGWVL LGVVLWSGAV WAQDASAGLS AKQAKLDGII QQLKQEQLAL
DKAKGQERSL LSELESMERR LTDGEQRLAE IQQEVQRIRL TLPALAARID SRTMAMARQQ
QLLAGHLRLF YGMEGKEALR ILSPQRHAKA TMQNMVYFRY LIEARNARFM QYKKSVEALQ
EASAAQQTAL ASLHQLANKE LALRGDLQQH RTQRSELLDQ VRQERNLHAR KVVELKEAHE
RLSQFMGKLS RAIDSAPPEQ PPRSRRVESR TPTFKKIVQV KGRLPDPVAG SAEEFEPGLF
YDVPKGSMVR AIHRAQVVYA DWFRGYGQLL ILNHGENVYS LYGHNDRLLV AQGDWVEAGD
AMAEVGNSGA LDGRVGLYFE IRQNGRTENA HRWLAAK
|
|---|
| |