Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3509 |
Symbol | |
ID | 4481106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4382250 |
End bp | 4383635 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724257 |
Product | carboxyl-terminal protease |
Protein accession | YP_867400 |
Protein GI | 117926783 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCG AAAAAAAATC CGCACGGGGC TGGCTATGGT TGGTCGTGGT GTTCATACTT TTCATTGTCG GTGTCCAAGC AGCCAATAAT GGGATGGCTC TTGGTAGAAT AACCTATGAA AAATTAAAAG TTTTTACTGA AGTGTTAGAT CTGGTTCGCA CACAATATGT GGAAGAGGCA GACGAAGAAA AACTGCTCTA CGGGGCGATT GGCGGCATGC TGGAAACCCT AGATCCCCAC TCCTCCTTTT TGAACCCGGA TAGTTTCAAA GAGATGAAGG TGGATACCAA GGGTGAATTT GGGGGTCTTG GTATTGAGAT CACCCGTGGT GAGCAAGCGA TCAAGGTGGT GGCTCCGATT GCGGATACCC CCGCCGACCG GGCGGGCATG AAAGCTGGGG ACCTGATCAT CAAGATTGAG GATGAGAGCA CCCAGGATAT GAACCTGATG GATGCGGTCA AGCGCATGCG CGGCAAGCCC GATACTGACA TAAAACTGAC GGTCGTGCGT GAGGGTGAGC CTAAGCCGCT GGTGTTTACC CTGACCCGTG CCATCATTAA GATCAGCAGT GTCAAGTGGC GGGCCGAGCA GAATAACCTA GCCTATGTGC GCATTACCTC TTTCAACGAA CAGGCGCGGC CCTTGTTGGA TAAGGCGCTG GATGAGATTG AAGCCGAGCT AAAAGGTAAT GTGCGTGGTC TGGTATTGGA TCTGCGCAAC AATCCCGGTG GCCTGTTGGA TCAAGCGGTG CAGGTGAGTG ATGCCTTTTT GAACAAGGGG CGTATTGTTT ACACCAAGGG TCGCATTCCT GGTAAAGATC TCTCTTTTGA CGCCCGCAAT GGCGACTTGA TGGAGGGGGC GCCCATTGTG GTGCTGGTCA ATGGTGGTTC GGCCTCGGCT TCAGAAATTG TGGCCGGTGC GTTGCAGGAC CACAAGCGGG CGGTCATTAT GGGGACCCAA TCCTTTGGTA AGGGTTCGGT ACAGACCATT TTGCCCCTCT CTGATGGTTC TGGTGTGCGT TTGACCACTG CGCTCTACTA CACCCCCAGT GGGCGCACCA TCCAGGCCAA GGGTATTGTG CCGGATATCG TGGTGGAAGA TCTGACCCTC ATCAAGCGTA AGGATCGTTT GGAGCGGACC AAAGAGAAGG ATCTAAAAGG TCACTTTAAC AACGATGGCA AACGTTCCAT GGATGATAAA GAAGAGACCA CCTCAACAAC AGAGGATAGC GCGAAAAAGG GTGACACCAA ATCCACAGAG GATGAGGATG ATCAGGCCGA GCGTGATAGC GTGACAGGTC GCAGCAAGGA CGATTACCAA TTGAAGCGGG CTTTGGATTT GCTGCGCGGT CTGCAAGTTT TTCAGACCAC CGCTGCGCAG AACTAA
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Protein sequence | MSSEKKSARG WLWLVVVFIL FIVGVQAANN GMALGRITYE KLKVFTEVLD LVRTQYVEEA DEEKLLYGAI GGMLETLDPH SSFLNPDSFK EMKVDTKGEF GGLGIEITRG EQAIKVVAPI ADTPADRAGM KAGDLIIKIE DESTQDMNLM DAVKRMRGKP DTDIKLTVVR EGEPKPLVFT LTRAIIKISS VKWRAEQNNL AYVRITSFNE QARPLLDKAL DEIEAELKGN VRGLVLDLRN NPGGLLDQAV QVSDAFLNKG RIVYTKGRIP GKDLSFDARN GDLMEGAPIV VLVNGGSASA SEIVAGALQD HKRAVIMGTQ SFGKGSVQTI LPLSDGSGVR LTTALYYTPS GRTIQAKGIV PDIVVEDLTL IKRKDRLERT KEKDLKGHFN NDGKRSMDDK EETTSTTEDS AKKGDTKSTE DEDDQAERDS VTGRSKDDYQ LKRALDLLRG LQVFQTTAAQ N
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