Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3501 |
Symbol | |
ID | 4483028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4371576 |
End bp | 4372046 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639724249 |
Product | CcmE/CycJ protein |
Protein accession | YP_867392 |
Protein GI | 117926775 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGCTG ATTATCAAAA GCGGATGCGC AATAAACGCT TGCTGCTTAT CGCCACCCTG GTGTTAGTGG GGGGAGCGCT GTTAACCTTG GTCTTTCAAT CCTTCAGCGG TGCCATGGTC TATTTTCACA CCCCCACGGA GGTGATGCAA AAAACCGTTG AACTCGTGGG TAAAAAGGTG CGCATTGGGG GCATGGTGCA AGCAGGCAGT TTAAGCCGCA AAGAGGGCAC CCTTGAGATC ACCTTTGATG TCACCGATGG GGAGACGCCC ATCTCCGTCT ATTACAAAGG GGTTACACCC GATCTGTTCC GGGAGGGGCA AGGCGTGGTG GTCGAAGGGG AGTGGTTAAA CACCAAACCC TTTATCGCCC ATACCATCCT GGCCAAACAC TCCGAAGATT ATATGCCTGT AGAGATGAAT GCCGAGGCGA TTCAAAAATC CCGCGAGAAC ATTCTTAAAT CTTTGCAATA A
|
Protein sequence | MKADYQKRMR NKRLLLIATL VLVGGALLTL VFQSFSGAMV YFHTPTEVMQ KTVELVGKKV RIGGMVQAGS LSRKEGTLEI TFDVTDGETP ISVYYKGVTP DLFREGQGVV VEGEWLNTKP FIAHTILAKH SEDYMPVEMN AEAIQKSREN ILKSLQ
|
| |