Gene Mmc1_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3501 
Symbol 
ID4483028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4371576 
End bp4372046 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content51% 
IMG OID639724249 
ProductCcmE/CycJ protein 
Protein accessionYP_867392 
Protein GI117926775 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCTG ATTATCAAAA GCGGATGCGC AATAAACGCT TGCTGCTTAT CGCCACCCTG 
GTGTTAGTGG GGGGAGCGCT GTTAACCTTG GTCTTTCAAT CCTTCAGCGG TGCCATGGTC
TATTTTCACA CCCCCACGGA GGTGATGCAA AAAACCGTTG AACTCGTGGG TAAAAAGGTG
CGCATTGGGG GCATGGTGCA AGCAGGCAGT TTAAGCCGCA AAGAGGGCAC CCTTGAGATC
ACCTTTGATG TCACCGATGG GGAGACGCCC ATCTCCGTCT ATTACAAAGG GGTTACACCC
GATCTGTTCC GGGAGGGGCA AGGCGTGGTG GTCGAAGGGG AGTGGTTAAA CACCAAACCC
TTTATCGCCC ATACCATCCT GGCCAAACAC TCCGAAGATT ATATGCCTGT AGAGATGAAT
GCCGAGGCGA TTCAAAAATC CCGCGAGAAC ATTCTTAAAT CTTTGCAATA A
 
Protein sequence
MKADYQKRMR NKRLLLIATL VLVGGALLTL VFQSFSGAMV YFHTPTEVMQ KTVELVGKKV 
RIGGMVQAGS LSRKEGTLEI TFDVTDGETP ISVYYKGVTP DLFREGQGVV VEGEWLNTKP
FIAHTILAKH SEDYMPVEMN AEAIQKSREN ILKSLQ