Gene Mmc1_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3486 
Symbol 
ID4481958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4355661 
End bp4356806 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content55% 
IMG OID639724234 
Productpeptidase M24 
Protein accessionYP_867377 
Protein GI117926760 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCTT ATCCCGCCCG ATTGATCTAT GCGGACAGCG AAAGCTGTGC CGACCTTTTT 
TATGCCACCG GCTTTTTTGC ACCGGACCCC TTTCTTTATG TTAAGGAGGG CGGTCCCCAA
GGGGCCAGCC ATATGGTGGT TTCGGCTTTG GAGATCGATC GGGCGCGGCG CTGTGCCAAG
GTGGATAAGA TTCACGATAT GGCCGACGTG CGTGATTTTT ATTTTGAGAT TCACGCCGAT
GGTGTGCCTG GAGAAGGGGA TCTGGTCGCG GCCTTTTTGA AAAAGCTGTC GGTGGGGGAT
GTGATTACGC CATGGGATTT TCCCTTGGCG ATTGCCGATA CCTTACGCCA CGAAGGGGTT
GGCGTGACCC CCATGAGTGG CCCGTTTTGG CCAGATAGGG CACACAAGCA GGATGATGAG
ATTGCCTATA TTGAGGCGGC ATTAGAGATC ACCGGCAAGG GTATGCAGGC GGGCATTGAT
CTTATCCATA TGGCGGATAT TGATGAGGAT GGCGGGCTTT ATTATAAAGG CGAAGCGCTT
ACGGCGGAGC GGGTACGGGC GAAGATTAAC GCAACCTTGG TTGAACTGGG GGCGATGCCC
CACCACACCA TCGTGTCTGG CGGCCAGCAG GGTGCTGACC CCCATGAGGA AGGGCATGGA
CCCTTGCCCG CGCACCAACC CATTATTCTG GATGTTTTTC CCCGTCACGA AAAGAGCGGC
TATTGGGGGG ATATGACCCG CACGGTCTGC CGCGGTGTGG CACCAGAGCC GCTCAAAAAA
GCTTGGGCTT GTGTACGGCA GGGGCAGGAG ATCGCTTTTT CCATGTTGTG CGCGGGGGTA
TCGGGCAAGG CGGTGCATGA GGCGATAACC AACTATTTCA CTGAACAGGG CTTTGCCACT
GGTCCGGGTG AGGATGGTAA ACAGCGGGGC TTTTTCCATG GCACCGGCCA CGGCTTAGGG
TTGGAGATTC ATGAATCTCC CCGTATTTCA AGCCGGGATA TGGTGCTAGA AGCGGGCCAT
GTGGTGACGG TTGAACCGGG ACTCTACTAT CCCGAGTGGG GTGGGGTACG TTTGGAGGAT
GTGGTGGTGA TCGAAAATGG TGGTTGCCGT AATTTGACCA AATTTCCCAA AATTCTGGAG
GTCTAA
 
Protein sequence
MDAYPARLIY ADSESCADLF YATGFFAPDP FLYVKEGGPQ GASHMVVSAL EIDRARRCAK 
VDKIHDMADV RDFYFEIHAD GVPGEGDLVA AFLKKLSVGD VITPWDFPLA IADTLRHEGV
GVTPMSGPFW PDRAHKQDDE IAYIEAALEI TGKGMQAGID LIHMADIDED GGLYYKGEAL
TAERVRAKIN ATLVELGAMP HHTIVSGGQQ GADPHEEGHG PLPAHQPIIL DVFPRHEKSG
YWGDMTRTVC RGVAPEPLKK AWACVRQGQE IAFSMLCAGV SGKAVHEAIT NYFTEQGFAT
GPGEDGKQRG FFHGTGHGLG LEIHESPRIS SRDMVLEAGH VVTVEPGLYY PEWGGVRLED
VVVIENGGCR NLTKFPKILE V