Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3486 |
Symbol | |
ID | 4481958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4355661 |
End bp | 4356806 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639724234 |
Product | peptidase M24 |
Protein accession | YP_867377 |
Protein GI | 117926760 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGCTT ATCCCGCCCG ATTGATCTAT GCGGACAGCG AAAGCTGTGC CGACCTTTTT TATGCCACCG GCTTTTTTGC ACCGGACCCC TTTCTTTATG TTAAGGAGGG CGGTCCCCAA GGGGCCAGCC ATATGGTGGT TTCGGCTTTG GAGATCGATC GGGCGCGGCG CTGTGCCAAG GTGGATAAGA TTCACGATAT GGCCGACGTG CGTGATTTTT ATTTTGAGAT TCACGCCGAT GGTGTGCCTG GAGAAGGGGA TCTGGTCGCG GCCTTTTTGA AAAAGCTGTC GGTGGGGGAT GTGATTACGC CATGGGATTT TCCCTTGGCG ATTGCCGATA CCTTACGCCA CGAAGGGGTT GGCGTGACCC CCATGAGTGG CCCGTTTTGG CCAGATAGGG CACACAAGCA GGATGATGAG ATTGCCTATA TTGAGGCGGC ATTAGAGATC ACCGGCAAGG GTATGCAGGC GGGCATTGAT CTTATCCATA TGGCGGATAT TGATGAGGAT GGCGGGCTTT ATTATAAAGG CGAAGCGCTT ACGGCGGAGC GGGTACGGGC GAAGATTAAC GCAACCTTGG TTGAACTGGG GGCGATGCCC CACCACACCA TCGTGTCTGG CGGCCAGCAG GGTGCTGACC CCCATGAGGA AGGGCATGGA CCCTTGCCCG CGCACCAACC CATTATTCTG GATGTTTTTC CCCGTCACGA AAAGAGCGGC TATTGGGGGG ATATGACCCG CACGGTCTGC CGCGGTGTGG CACCAGAGCC GCTCAAAAAA GCTTGGGCTT GTGTACGGCA GGGGCAGGAG ATCGCTTTTT CCATGTTGTG CGCGGGGGTA TCGGGCAAGG CGGTGCATGA GGCGATAACC AACTATTTCA CTGAACAGGG CTTTGCCACT GGTCCGGGTG AGGATGGTAA ACAGCGGGGC TTTTTCCATG GCACCGGCCA CGGCTTAGGG TTGGAGATTC ATGAATCTCC CCGTATTTCA AGCCGGGATA TGGTGCTAGA AGCGGGCCAT GTGGTGACGG TTGAACCGGG ACTCTACTAT CCCGAGTGGG GTGGGGTACG TTTGGAGGAT GTGGTGGTGA TCGAAAATGG TGGTTGCCGT AATTTGACCA AATTTCCCAA AATTCTGGAG GTCTAA
|
Protein sequence | MDAYPARLIY ADSESCADLF YATGFFAPDP FLYVKEGGPQ GASHMVVSAL EIDRARRCAK VDKIHDMADV RDFYFEIHAD GVPGEGDLVA AFLKKLSVGD VITPWDFPLA IADTLRHEGV GVTPMSGPFW PDRAHKQDDE IAYIEAALEI TGKGMQAGID LIHMADIDED GGLYYKGEAL TAERVRAKIN ATLVELGAMP HHTIVSGGQQ GADPHEEGHG PLPAHQPIIL DVFPRHEKSG YWGDMTRTVC RGVAPEPLKK AWACVRQGQE IAFSMLCAGV SGKAVHEAIT NYFTEQGFAT GPGEDGKQRG FFHGTGHGLG LEIHESPRIS SRDMVLEAGH VVTVEPGLYY PEWGGVRLED VVVIENGGCR NLTKFPKILE V
|
| |