| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3484 |
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| Symbol | |
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| ID | 4481956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4352502 |
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| End bp | 4353821 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639724232 |
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| Product | gid protein |
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| Protein accession | YP_867375 |
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| Protein GI | 117926758 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAA TAACCATCAT TGGTGCCGGT TTGGCGGGCT CTGAGGCCGC TTGGCAGCTT
GCCCAGCGCA ATATTCCGGT ACGTCTGTAT GAGATGCGCC CCCACACCAT GACCCCAGCC
CACCAGACCG ATCATTGCGG CGAGTTGGTC TGCTCAAACT CCTTGCGCTC CGACGACCAC
AGCAACAGTG CGGTGGGTCT CTTGCACCAA GAGCTGCGCG GGCTGGATAG CTTAATTATG
CGTTGTGCCG ACCAACATCG GGTGCCCGCT GGTGGTGCGT TGGCGGTAGA CCGCCACGCC
TTTTCCGCCG CCATAACCGA GGCCCTTGAG CAGCACCCCC TTATTGAGTT GATCCGTCAG
GAGATCGTCA CCCCGCCTAT GGAAGAGGAT GGGTATACCA TCATCGCTAG CGGACCCCTC
ACAGCGGGCG GTCTGGCTCA CTGGATTGAA GCACAGGTGG GCAAACGCAT GGCCTTTTTT
GACGCCATTG CCCCCATCGT CAGCCACGAT TCCATTGATT TTAGCAAAGC CTGGAAACAG
TCCCGTTATG ATAAGGGCGA TGGCAACGAT TATATTAACT GTGCCATGGA TGAGGCTCAA
TATCACACTT TTGTGCAAGC ACTCTTAGAG GGGGAAAAGG TGGCCTATAA GGAATTTGAG
GCCAACACAC CCTATTTTGA TGGGTGCCTA CCCATTGAAG TGATGGCGGA ACGGGGCGTA
GAGACCCTAC GGTATGGGCC TATGAAACCG GTTGGGCTGA CCAACCCTCA CAAAGCGGAA
AAATCCTACG CCATTGTGCA GCTGCGCCAG GATAATAAAT TGGGCACCCT GTGGAATATG
GTGGGGTTTC AGACCAAACT TAGCTGGCCT GCACAGAAGC GCATCTTTGC CACCATTCCC
GGTTTGGAGC AGGCTGAATT TGTCCGGTTG GGGGCGCTAC ACCGTAACAC CTTTATTAAC
AGCCCCACCC TGCTCAGCGA GACCCTGCAA CTCAAAACCC AACCCCGCCT GCTGTTTGCC
GGACAGATCA CCGGCGTCGA GGGTTATGTG GAATCCACCG CCTGCGGCTT AATGGCGGGT
CGTATTGTGG CCCATAAGAT GCGGGGGGAG GCCGTCAGCA TTCCCCCACA GACCACCGCG
CTGGGGGCAC TCATGCGGCA TATTACAGGG GAGGCTGACG CCACCCATTT TCAACCCATG
AACGTCAATT TTGGCCTGTT TCCCAACTTT ACCGAACGGG TCCCCAAAAA ACAGCGTAAA
GAGGCCTATG CCCAGCGTGC CTTAACCCAT ATGCAGCAGT GGTTGCAGGA GAATTCCTAA
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| Protein sequence | MAKITIIGAG LAGSEAAWQL AQRNIPVRLY EMRPHTMTPA HQTDHCGELV CSNSLRSDDH
SNSAVGLLHQ ELRGLDSLIM RCADQHRVPA GGALAVDRHA FSAAITEALE QHPLIELIRQ
EIVTPPMEED GYTIIASGPL TAGGLAHWIE AQVGKRMAFF DAIAPIVSHD SIDFSKAWKQ
SRYDKGDGND YINCAMDEAQ YHTFVQALLE GEKVAYKEFE ANTPYFDGCL PIEVMAERGV
ETLRYGPMKP VGLTNPHKAE KSYAIVQLRQ DNKLGTLWNM VGFQTKLSWP AQKRIFATIP
GLEQAEFVRL GALHRNTFIN SPTLLSETLQ LKTQPRLLFA GQITGVEGYV ESTACGLMAG
RIVAHKMRGE AVSIPPQTTA LGALMRHITG EADATHFQPM NVNFGLFPNF TERVPKKQRK
EAYAQRALTH MQQWLQENS
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