Gene Mmc1_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3480 
Symbol 
ID4481952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4346065 
End bp4347021 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content60% 
IMG OID639724228 
Productradical SAM domain-containing protein 
Protein accessionYP_867371 
Protein GI117926754 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAT TTGCCACAGC CTTGCAGCAG CATACCGGCA CACCGGTTAT GGAGGCGGCG 
TCACTCAGCC TCATTCAGGT GAATGTGGGT TTGACTTGCA ATCTACAGTG CCGTCACTGC
CATGTGGGGG CTGCTCCCCA GCGTACGGAG CAGATGAGCT GGGCGGTGAT GCAGCAGGTG
CTGGCGTTGA TCACCCAAAG CGGCTGTAAA CAGGTGGATA TTACCGGCGG TGCGCCAGAA
ATGAACGCCC ATATTCAGCC CTTTATACAA GCGCTGCGGG CGAGGGATGT GGCGGTGCAA
CTACGCACCA ACCTGACGCT GCATCGGGAC CCCGACTGGC ACGCCATGGC CCCCTGGTTG
CGGGATCACG GGGTGGTGCT GGTGGGCTCT ATGCCCTGTT ATGTGCAGGA AAATGTGGAT
CAACAGCGGG GCGATGGGGT CTACCAGGCG TCCATCGCCG CCCTGCAACG GCTCAACCAA
TTGGGTTATG GGGTGGCCGG AGGGGTTCCC CTAAACTTGG TCTACAATCC GGGCGGTGCC
CACCTGCCGC CGCCCCAAAG TAGCCTTGAA GAGGCCTATA AAAAGGCGAT GTGGCAACAG
TATGGCATTA CCTTTGACCA GCTCTTAACG TTGACCAATA TGCCCATTGG GCGGTTTCGC
GCCGACTTGC GCCGGGAGGG CCAGGAGCAA GCTTATTGGG GTTTGCTGCA AGCATCCTTT
AACCCAGCCA CCGTGGCAGG CTTGATGTGT CGTCATCAGG TGAGTGTGCG CTGGGATGGT
GTGCTGTTTG ATTGCGATTT TAATCTTGCC CTCGATCTGC CTGCCCGTGT GTCGGGCGGG
GCGCGGTTGG GCGAGGTGAC CGTGGCCACG CTACGCAGTC GCCGGGTGGT TATTGAACAG
CACTGCCTGG GCTGCACGGC CGGGTGCGGT TCATCGTGCG GTGGAGCGTT GGTTTGA
 
Protein sequence
MNLFATALQQ HTGTPVMEAA SLSLIQVNVG LTCNLQCRHC HVGAAPQRTE QMSWAVMQQV 
LALITQSGCK QVDITGGAPE MNAHIQPFIQ ALRARDVAVQ LRTNLTLHRD PDWHAMAPWL
RDHGVVLVGS MPCYVQENVD QQRGDGVYQA SIAALQRLNQ LGYGVAGGVP LNLVYNPGGA
HLPPPQSSLE EAYKKAMWQQ YGITFDQLLT LTNMPIGRFR ADLRREGQEQ AYWGLLQASF
NPATVAGLMC RHQVSVRWDG VLFDCDFNLA LDLPARVSGG ARLGEVTVAT LRSRRVVIEQ
HCLGCTAGCG SSCGGALV