Gene Mmc1_3471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3471 
Symbol 
ID4482827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4334176 
End bp4334721 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content56% 
IMG OID639724219 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_867362 
Protein GI117926745 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATC CGCAGCTTAG AGAACAGGCA CTTAGCACGC TGGTCCAACA CGGTTGGTCC 
AGCGTGCGCC CTGGGCTTTA TCTTCACGGC CCCAGTCAAC GGTTGATGGG GTTTTATGGC
GAGCAAAGTG TGCTGGGGGT GTGGCCTGTC TCAACCGGTT TAAAGGGCTT TGGCAACGCC
CAGGATAGTG GACAAACCCC CATGGGTTTG CACACCCTGG GGGAGTGTAT TGGGGCCGGT
CAGCCCTTGG GTATGTGCTT TGTGGGGCGT CAAGCCACCG GGCAGATCGT AGAGACCACC
GAGGATCGTA GTCGCGACTA TATCACCACC CGCATCATCC GATTATGTGG TGCTGTGCCG
GGCTTTAACC AGGGGCCGGG TGTGGATAGT TATGAGCGTT ATATTTACAT CCATGGCACG
CCCCATCTGG CGGATTTAGG TCAACCCGTT TCTCATGGAT GTGTTAGGAT GCATTCGGCC
CACCTGCTGG AGCTGTTTGA TCAGGTTGGC CCTGGAGATC TGCTCTATAT TGAGCCGGGT
CGGTAG
 
Protein sequence
MIDPQLREQA LSTLVQHGWS SVRPGLYLHG PSQRLMGFYG EQSVLGVWPV STGLKGFGNA 
QDSGQTPMGL HTLGECIGAG QPLGMCFVGR QATGQIVETT EDRSRDYITT RIIRLCGAVP
GFNQGPGVDS YERYIYIHGT PHLADLGQPV SHGCVRMHSA HLLELFDQVG PGDLLYIEPG
R