Gene Mmc1_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3464 
Symbol 
ID4482820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4324733 
End bp4325245 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content55% 
IMG OID639724212 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_867355 
Protein GI117926738 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.871319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA CCCCACAGAT CGCCATTTTA ATGGGCTCTG ACTCCGACTG GGATGTGATG 
TCCGAAGCCG GTAAGGTTCT CAAAGGGTTT GATATTCCCT TTGAGATGCT GGTTACTTCA
GCCCACCGTA CCCCAGAACG AACCCATGCC TACGCCAAAT CCGCCGCCGC ACGAGGCATT
CTCGCCTTTA TTGTCGGGGC AGGTGCCGCG GCCCATTTGG CTGGGGTGAT CGCCTCAGAA
AGTAATCTAC CGGTGATTGG CGTGCCCTTG TCCGCGACTG AACTCAAAGG GATGGATGCC
CTGCTCGCGA CCGTGCAAAT GCCAGGGGGC GTTCCTGTGG CAACCATGGC CATCGGTAAA
GCTGGGGCGA AAAATGCGGG TATCTTCGCC GCGCAAATAC TGGCACTTAG CGATCCCCAG
TTGGCGGCAA AGTTGGTCCG CTATCGTGAA GAAATGGCCG CTGCGGTGAC TAAGAAAAAT
GAAGCCCTAC AGGCCAAACT GGCCGATTTT TAA
 
Protein sequence
MNNTPQIAIL MGSDSDWDVM SEAGKVLKGF DIPFEMLVTS AHRTPERTHA YAKSAAARGI 
LAFIVGAGAA AHLAGVIASE SNLPVIGVPL SATELKGMDA LLATVQMPGG VPVATMAIGK
AGAKNAGIFA AQILALSDPQ LAAKLVRYRE EMAAAVTKKN EALQAKLADF