Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3464 |
Symbol | |
ID | 4482820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4324733 |
End bp | 4325245 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639724212 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_867355 |
Protein GI | 117926738 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.871319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACA CCCCACAGAT CGCCATTTTA ATGGGCTCTG ACTCCGACTG GGATGTGATG TCCGAAGCCG GTAAGGTTCT CAAAGGGTTT GATATTCCCT TTGAGATGCT GGTTACTTCA GCCCACCGTA CCCCAGAACG AACCCATGCC TACGCCAAAT CCGCCGCCGC ACGAGGCATT CTCGCCTTTA TTGTCGGGGC AGGTGCCGCG GCCCATTTGG CTGGGGTGAT CGCCTCAGAA AGTAATCTAC CGGTGATTGG CGTGCCCTTG TCCGCGACTG AACTCAAAGG GATGGATGCC CTGCTCGCGA CCGTGCAAAT GCCAGGGGGC GTTCCTGTGG CAACCATGGC CATCGGTAAA GCTGGGGCGA AAAATGCGGG TATCTTCGCC GCGCAAATAC TGGCACTTAG CGATCCCCAG TTGGCGGCAA AGTTGGTCCG CTATCGTGAA GAAATGGCCG CTGCGGTGAC TAAGAAAAAT GAAGCCCTAC AGGCCAAACT GGCCGATTTT TAA
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Protein sequence | MNNTPQIAIL MGSDSDWDVM SEAGKVLKGF DIPFEMLVTS AHRTPERTHA YAKSAAARGI LAFIVGAGAA AHLAGVIASE SNLPVIGVPL SATELKGMDA LLATVQMPGG VPVATMAIGK AGAKNAGIFA AQILALSDPQ LAAKLVRYRE EMAAAVTKKN EALQAKLADF
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