Gene Mmc1_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3417 
Symbol 
ID4483816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4269331 
End bp4270026 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content62% 
IMG OID639724166 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_867309 
Protein GI117926692 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTGCGC ACGGGCCGAT ACCCCTGTTG CTGGGGGCAG GTGGTTTGGG CAGTGCCACG 
GCGTTGGCCC TGGGTCTGTT GGGGGTGCGC CGCTTTGCGG TGATGGATGC TGATCGGGTT
GAGCTTTCTA ACCTACAGCG GCAGGTGATC TATGACCAAG GGGATGTGGG GCAGTTAAAG
GTCGAGGCGT TGGCGGCGCA GATGGCGCGG CGCTTTCCCG GTAGCGAAAT CCAGTGCATG
GCCGAGCGGC TACTGCCCGA GGCGATGGTG GCCCGCTTTG CCCAGCACAG CTTGGTGGTG
GATGGTAGCG ATAATTTTAC CACCCGTTTT GCCGCCAATG ATGCCGCCTT GGTTGCTGGG
GTACCCTTGG TGCATGGGGC GATTACCGGT TGGCGTGGGC AGGTGATGAC GGTTACGCCG
GGGTGTTCTC CCTGTCTGCG CTGTCTGTTT GAAGCCCCAC CCAGCATCGA GGCGCCCACC
TGTCAGGGGG CCGGGGTCTT GGGCAGCGGG GTGGGTGAGA TCGGTGCCAT CATGGCCCAA
CAGCTCTACA CCCTTAGGCA GGGTGTGGGC GAGCTGCTGC ATGGGCAGCT CTATACGGTG
GATCTACGGC GTGGGGTACG TCGTGTGGTA CGGTTTTATG CACGTCCAGG GTGTGGCTGT
GGTATGGCCC ATCAAGGGTT GGCACAGGTA GAGTGA
 
Protein sequence
MSAHGPIPLL LGAGGLGSAT ALALGLLGVR RFAVMDADRV ELSNLQRQVI YDQGDVGQLK 
VEALAAQMAR RFPGSEIQCM AERLLPEAMV ARFAQHSLVV DGSDNFTTRF AANDAALVAG
VPLVHGAITG WRGQVMTVTP GCSPCLRCLF EAPPSIEAPT CQGAGVLGSG VGEIGAIMAQ
QLYTLRQGVG ELLHGQLYTV DLRRGVRRVV RFYARPGCGC GMAHQGLAQV E