Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3416 |
Symbol | |
ID | 4483815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4268332 |
End bp | 4269267 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639724165 |
Product | cysteine synthase |
Protein accession | YP_867308 |
Protein GI | 117926691 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | [TIGR01136] cysteine synthases [TIGR01139] cysteine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCGAA TCTATAACGA TATCACCGAA ACCATCGGCA ACACGCCGCT GGTGCGCCTG AATCGCATCA GCCAAGGGTT GGATGCTGAG ATTCTGGTTA AATTGGAGTA TTTCAACCCC ATGGCTTCGC TCAAGGACCG TATTGGTCTG GCGATGATCC AAGAGGCCGA GGCTAAGGGG CTGATCACTA AAGATACGTT GATTATTGAG CCAACCTCGG GCAATACCGG CATCGCCCTG GCCTTTGTCT GTGCCGCGCG GGGTTATCAA TTGGTATTAA CGATGCCAGA GTCCATGTCC ATGGAGCGGC GCAAGCTGTT TGAGTTGCTG GGCGCGCAGG TGGTGTTAAC CTCGGCCATG GACGGCATGA AGGGAGCCAT TGATAAAGCC CAGGAGCTGC TGGCGGAGAC CGACAAAGGG TTTATGCCCA ACCAGTTTGA TAATGGCGCC AACCCAGCGG TCCATGAGAC CACCACCGCT GAGGAGATCT GGCGGGATAC CGATGGTCAA TTGGACCTGT TTTTGGCCGG CGTGGGCACC GGTGGTTGTT TAACCGGGGT GGCGCGCACG CTGAAAAAAC GCATACCCCA GTTACGGGTG GTGGCGGTGG AGCCCGAATC CTCTCCGGTG CTCTCTGGGG GCATGCCCGG CCCGCACAAA ATCCAGGGTA TTGGGGCCGG TTTTGTGCCA CGGGTGCTGG ATACCCAGTT GATGGATGAG GTGGTGCGGG TGGGGGATCA AGAAGCCTTT GAAGTGGCCC GGCGCATGGC CCGAGAAGAG GGTATCGCCT GTGGTATCTC CTCAGGGGCG GTGGTGGCGG CGGCGCTGCA ACTGGCCCGT ACACCCCGCT ACGCAGGCAA ACGGTTTGTG CTGGTCTTAG CCAGCTTTGC GGAACGCTAT CTCTCCACCG AGCTGTTTCC CTCACAGCTA CCCTAA
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Protein sequence | MGRIYNDITE TIGNTPLVRL NRISQGLDAE ILVKLEYFNP MASLKDRIGL AMIQEAEAKG LITKDTLIIE PTSGNTGIAL AFVCAARGYQ LVLTMPESMS MERRKLFELL GAQVVLTSAM DGMKGAIDKA QELLAETDKG FMPNQFDNGA NPAVHETTTA EEIWRDTDGQ LDLFLAGVGT GGCLTGVART LKKRIPQLRV VAVEPESSPV LSGGMPGPHK IQGIGAGFVP RVLDTQLMDE VVRVGDQEAF EVARRMAREE GIACGISSGA VVAAALQLAR TPRYAGKRFV LVLASFAERY LSTELFPSQL P
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