Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3403 |
Symbol | |
ID | 4484089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4244795 |
End bp | 4247668 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724151 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_867295 |
Protein GI | 117926678 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCATA TCAATGTCCA TACAAATCTC CGTAACTCCA GGCCGTTGAT TTTATTCGCT GGGGCATTGT TGCTGTTGTT GCTGACCCAG TTGTGGGTCA TTACCGGAAA ATATCAACAG GATATGCGTG AGGATCTGCA TGGTAGCATC AAAGCCCAGC TTGCCTTGCT CGGTGCTACG TTGCAGGAAG CCGCCATCCG TGGTGACCTT GCTCAGATCA AGCGCAACCT TGAAATGTGG GGGCAGGCTC ACTCAGAAAT TTTGGCCATA CGGGCGATCT CTCCCAACGG GTTTGAGTTG GTTCATTATC AAGCGGGCGC GTTGCAGGGT GATATGTATG TCCATAAAAG CGCAATAACC GTAGATGGGC GTCAGCTCAT AACCCTGGAA GTTACCCATA ATTTAAGCAT GATCAATGAC CGACTGCGTA CCATGACCCT CTACATGGGG GTGGTCTCCA GTCTGATATC GGGACTATTT GCCCTAACGG TTTGGTGGAT TATGACCCGT TTTGCCATCG CGCCGCTCAA CCAAGAGTTG GCAGCACGGC AGCGCGCGGA AAATATGATA CGCGAGAGTC AACAGGCGCT GGTCAAAGCA CAATTGGTAG CCCATATGGG GAGCTGGAGT AGCGATGTCG CCATTGAACA TATGGAGTGG TCCCAGGGGC TCTGCCAGCT GTTGGGGGTG AAGGTTGATG AGGCACCTCT ACCGGTGGAG CGCCTGTTGG GGTTGGTTCC ACAGCCCCAG CAACAGTCTG TGTTAGAGAT GTTGGATCGT CTCAGTCAAC AGCAGCAAAA TCAAGTCCAG ATGGAGCACC GCATTCATCG CGAAACCGGT GGGGTGTTGC AGGTGCTGCA CCGCTGTGAA CGGGTGGAAG GGGCCAATGG CCCACGGGTG CAGGGCATTT TAATTGATAC CAGTCAGAGC GAGGCACTGC GTGGGGCTTT GGCGGCCAGT GAAGAGAAAT TTCGTAACCT GTTCGACAAT ATGGGCAGCG GGGTGGCCAT TTATGAAGCC ATAGATAATG GCGATGATTT TATTATTCGT GGCTTTAATA AGGCGAGCAC GGTTTTTACC AAACTCGACC GCGAGAGTAT ATTGGGAAAG CGGGTCACGG AGATTTTTCC GGGCATCCGG GCGATGGGGC TGCTGGATCT TTTTAAGCGG GTATGGCACA GCGGCGTGCC GGAACATTTA CCATTAACCC AATATAGCGA CCAACGCATT ACACAGTGGG TGGAAAACTA TGTCTACCGT TTAGAAAATG GTGAGGTGGT CGCGGTATTT GATGACGTTA CTTCCAACCG ACAGGCCCAG CAGGAGCTGG CCCAGAGTGA GCTGCGTTTT CGCGAGATGG CCGAGACCTT GGAGGATGTC TTCTGGATCA CCAGTGCCCA TGGGCACCGC ATACTCTATG TCAATCCAGC GTTTGAAAAG GTGTGGGGCT ATTCGGTACA GGCGCTGGAG CAAGATATTA ACCTCTGGTC GCAGTCGATC CACCCGGAGG ATCGTGCGCG GGTCGAAGAG GCGCTCCTCC AAAGCACAAG CCATGCGGAT GGTTTTGATC AGGAGTACCG TATTGTGCGG GGGGATGATG GCCAATTGCG CTGGATACAT AACCGAGGTT ATCCCATTGA GGAGCAGGGG CAGGTAGTCA GAGTAGTTGG GTTAGCCACG GATATTACAG CTAAAAAAGA GAATGAAGCA GCGCTACAGC AGGCGATGCG ACAGGCGCAG CAGGCCAGTC AAGCCAAGAG TGAGTTTTTA GCGGCCATGT CCCATGAGAT CCGTACCCCA ATGAACACGG TTATTGGTAT GACCGAGCTG CTGCTGGAGA CCCCTTTGAG TGAAGAGCAG CAGCGTTATG TGCGGAGTTT GCGCAGCTCG GGTACAGCGT TGTTGGACGT GATTAACGCC ATTTTGGATC TTACCCGTAT TGAGTCGGGC CGTCTGGAAC TGACCGAAGA GCGTTATGAT CTCCATGAAT TAATGCGTGA AACCTGTGAA GTTATGGGCT ATGCCGCGGC CAAAAAGAAG CTGGAGATGG TCTTGGAGAT GAATCCCAAT ACCCCCAACT ATTTGGTGGG GGATGCGCCG CGTTTGCGTC AGATCCTGAT CAATTTGGTG GGAAATGCCA TAAAATTTAC CGAAGTGGGA CAGGTTTGTG TGCGTGTTTG GTTAGATGAA GCGGTAGAGC GCTTACGCAT TGAGGTCGAG GATAGTGGAA TTGGTATTCC CAAGGAGCAC ATAAACACCA TTTTTGATAT GTTTGCCCAA GCAGATTCCA GTATGGCCCG TCGTTTTGGT GGCAGTGGGC TGGGTTTGAC CATCTCTCAG CGTTTGGCTC AGCTTATGGG GGGGCGTCTC GCGGTGCAGA GTCAGGTACA AAAGGGCAGT TGCTTTACCT TGTCCATGCC TTGCCAAATT GGTGAAGAAC CTGCACAAGA GGTGGTAACA GAAACGCAGA GTTTAACCCG TCAGACTTTA CGCATTTTGC TGGCGGAGGA CTCTGTGGAT AACCAAAATT TAATTCAGGC CTATCTCTCC CGTACATCCC ACGAACTGAT CTATGCCATC AATGGAGAAG AGGCTGAGCG CTACGTTAAA TCCGGGCAGC CAGTGGACCT GATCTTGATG GATATACAGA TGCCCTTGGT GGATGGCTAT ACCGCCACCC GTCGCATTCG AGCATGGGAA CAGCAGCAGG GGCGGCCTGC GGTACCGATT GTGGCTTTAA CCGCCCATGC TTTGAAAGAG GATGAAATGC GCAGTTTAGA AGCGGGTTGT GACGCACACT TGACCAAGCC CATCGGTAAA AAGCAGCTAT TGCAGGTATT GGCACACTAT CCACGTCGGG AGAGCACCCC GTAA
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Protein sequence | MAHINVHTNL RNSRPLILFA GALLLLLLTQ LWVITGKYQQ DMREDLHGSI KAQLALLGAT LQEAAIRGDL AQIKRNLEMW GQAHSEILAI RAISPNGFEL VHYQAGALQG DMYVHKSAIT VDGRQLITLE VTHNLSMIND RLRTMTLYMG VVSSLISGLF ALTVWWIMTR FAIAPLNQEL AARQRAENMI RESQQALVKA QLVAHMGSWS SDVAIEHMEW SQGLCQLLGV KVDEAPLPVE RLLGLVPQPQ QQSVLEMLDR LSQQQQNQVQ MEHRIHRETG GVLQVLHRCE RVEGANGPRV QGILIDTSQS EALRGALAAS EEKFRNLFDN MGSGVAIYEA IDNGDDFIIR GFNKASTVFT KLDRESILGK RVTEIFPGIR AMGLLDLFKR VWHSGVPEHL PLTQYSDQRI TQWVENYVYR LENGEVVAVF DDVTSNRQAQ QELAQSELRF REMAETLEDV FWITSAHGHR ILYVNPAFEK VWGYSVQALE QDINLWSQSI HPEDRARVEE ALLQSTSHAD GFDQEYRIVR GDDGQLRWIH NRGYPIEEQG QVVRVVGLAT DITAKKENEA ALQQAMRQAQ QASQAKSEFL AAMSHEIRTP MNTVIGMTEL LLETPLSEEQ QRYVRSLRSS GTALLDVINA ILDLTRIESG RLELTEERYD LHELMRETCE VMGYAAAKKK LEMVLEMNPN TPNYLVGDAP RLRQILINLV GNAIKFTEVG QVCVRVWLDE AVERLRIEVE DSGIGIPKEH INTIFDMFAQ ADSSMARRFG GSGLGLTISQ RLAQLMGGRL AVQSQVQKGS CFTLSMPCQI GEEPAQEVVT ETQSLTRQTL RILLAEDSVD NQNLIQAYLS RTSHELIYAI NGEEAERYVK SGQPVDLILM DIQMPLVDGY TATRRIRAWE QQQGRPAVPI VALTAHALKE DEMRSLEAGC DAHLTKPIGK KQLLQVLAHY PRRESTP
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