| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3396 |
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| Symbol | |
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| ID | 4484082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4234886 |
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| End bp | 4237669 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639724144 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_867288 |
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| Protein GI | 117926671 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTA TAGAGCCTAA AATATTGATT GTCGATGATC GACCCGCTAA CTCTATGGCG
CTAAGGGTAT CTCTTTCCAA ATTGGATGTG CAGATCATTG AGGCCCCCAG TGGCAATGAT
GCTTTGGGGC TAATGGTCGA GCACGACTTT GCACTCATGC TGTTGGATGT CAACATGCCG
GGCATGGATG GTTACGAGGT CGCTAAAATT GCCCGCTCGT GGGAACAGAC CAAAGATATT
CCCATCATTT TTATGACCGC CATCCACCAT GATGATGCCC ACCGCGCAAC GGGTTATCAA
CTTGGGGCTG CGGACTATAT TGACAAACCG GTTGATACCA CCATCCTCCT TAGCAAAGTG
AAGGTTTTTG TCGACCTTTA CCGTTCTCGT CAAAAACTGC TAGAGGCCAA CCGACAGTTG
AGGGAGTCTA TCTCGTTACG CCGGGGTGTA GAAGAGCAGT TACGCATGAC ACAATTTGCC
ATTGATCGCC TGGGGGATAT GGTTTTTCTC ATCTCACCCC AAGGCAAAAT TGTGTATGTT
AATGAAAAAG CCTGCCAAAA ATTGCAATAT GAAAAAGAAC AACTGCTTCA GTTGAGTATT
GAGCAGATCG GCTGTGGCCA TATTGAGACC TCTTGGAAAG AGCATTGGCT TAAATTAAAA
TCCTACCAGA CCCTGACCTT TCAGTCCCAT TTACGCACCA AAAATAGCAT TCAATTTCCC
GTTGAGATTC AATCCAACTA TGTAAAAACT TCATCTCATG AGTATAACTA TGCCTTTATT
CGGGATATTA CCGACAGGGT CCATCAAGAA GAGCGGCTCA GGTTGCTCTC TCGGGCTGTT
GAGTATGGCC CTGCAAGTAT TGTTATTACC GATGCCGAGG GGCACATCCA GTATGTTAAC
CCCAAGTTTG AAAAAATAAC CGGCTACGGG GCAGAAGAGG TGATTGGCAA TAAACCCAGC
TTACTAAAAT CCGGGCAGAC TGAACCGGCC ATCTATGATG CCCTTTGGGA CAGCATTAGT
CGGGGCCATG AGTGGAGAGG TGAGCTTATC AACAAGCGCA AAGATGGTTC GCTTTATTGG
GAAATGGCTC ACATTAGCCC GGTTCTCTCT AAGACCAGTG GCAAGATTAC CCATTTTGTC
GGCATTAAAG AGGACATTAC CTCGTTAAAA GAGACGGAGG CCCACCTGGA GTTGACCCAG
AAAAAGGCCG AGGCGGCTTC CCTGGCGAAA AGCGAATTTT TGGCCACCAT GAGCCATGAA
ATACGGACCC CCATGAACGC CATTTTAGGC ATGACGGAGT TATTGGGCGA GACTCAGTTG
AGCATTGAAC AGCGGGGCTT TTTGTCTGTC TGTCGCTCTG CCGGTGAAAA TCTATTACAG
ATTATCAACG ATATTCTGGA TATTTCCAAA GTTGAATCGG GTGGGCTGGA GCTCCAACAT
GTCCCCTTTA ATCTGCGCCG TATTGTGTAT GATGCGGGCG AGGTGATTCG TTTTAGATCT
CATGAAAAGG GGTTGCACCA GCTGATTTTT ATTGATGAAA GTGTGCCGGA GTGGTTATTG
GGTGATCCGG CCCGTATACG TCAGATTTTG ATCAATTTTC TAGGCAACGC CATTAAATTT
ACCGAAGCGG GCACCATTGC CACGGTGGTC AGCACCACCG CCGGCAAAGG CAGTCAGGTA
GAGATTGTTT TTCGGGTCAT TGATACCGGT ATTGGTATAC CTGAAAGCAA GCAGAGCGTG
GTGTTTGATG CCTTTAAGCA GTTGGATTCC TCCACCCAGC GGCGCTACGG GGGTACCGGT
CTGGGTTTGA CCATCTCCAA AAAACTGGCC GATCTGATGG GGGGCCAACT TGGCTTAAAA
AGCCAGGAAG GCCACGGCAG CACCTTCACT TTATCCCTTC GGTTAAGCCG CTCAACAGGG
CCGAGTAAGA GCAGTGCCCA GCCTGCGCCC ATATTTGCGG GGATGCATAT TTTAATATGG
CACACACATC CTATTAAACG CATGAATATT GAAGAGACCT TAATCCGTTA TGGTGCAACC
CTGCACCATT GCAGCGAGGT TGACCCTTTT CTACGTTGTG CGCAGGCCAA CCATGCAGCT
ACGCCCATTG ATCTGTTATT TATTCACTTT GATCACGCCG ATGTCGATGT ATTGAGTGAG
ATCAAGCGTC TTAGGGCGGT ATCCCCCTGG GAGAAGATTC CGGTATTAAT CTATGGACGC
TGCCACGATC GCTCATTACC AGCTAAGATG TTGCAACAGG GGGTTAATTT TTTGCCTGAA
CCGGTTTTTC CAGATGTCTT ACTGGATGAA CTTTGCCGCA TTACGCAAAA GTCCCAGCAA
CCAGAAGTGG ACAGCAAACC AAGCAGAGCC TCGCTGCGTG TCTTGTTGGT TGATGACAGC
GAAGATAATT TATTGCTTGC CTCGACCTTT TTAAAGAGCA CGCCCCATAT TGTCCAAACC
GCCACCAATG GCAAGCAGGC TGTGGAGCGC TTTACCCAAA CATCGCCCCG CTTTGATTTG
ATTTTGATGG ATATACAGAT GCCTGAAATG GATGGTTTTC AAGCCACAGC GGCCATTCGG
GCATGGGAAA AAGCGCATAA AAAGCCGCCC TGCCCGATTA TTGCCCTAAC CGCCTTTGCC
ATGTCGGATG ACGAGTCAAA ATGTCTTTCT GCGGGATTTA CGGGTTATGT GAGCAAGCCC
ATCAGCAAAG CCCGTTTACT GGAGGCCATG GAGGCCTGTA CCGCTGCAAA AGCCCCAACC
CAAGCTGAAG GACAAGTGGA TTAA
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| Protein sequence | MSLIEPKILI VDDRPANSMA LRVSLSKLDV QIIEAPSGND ALGLMVEHDF ALMLLDVNMP
GMDGYEVAKI ARSWEQTKDI PIIFMTAIHH DDAHRATGYQ LGAADYIDKP VDTTILLSKV
KVFVDLYRSR QKLLEANRQL RESISLRRGV EEQLRMTQFA IDRLGDMVFL ISPQGKIVYV
NEKACQKLQY EKEQLLQLSI EQIGCGHIET SWKEHWLKLK SYQTLTFQSH LRTKNSIQFP
VEIQSNYVKT SSHEYNYAFI RDITDRVHQE ERLRLLSRAV EYGPASIVIT DAEGHIQYVN
PKFEKITGYG AEEVIGNKPS LLKSGQTEPA IYDALWDSIS RGHEWRGELI NKRKDGSLYW
EMAHISPVLS KTSGKITHFV GIKEDITSLK ETEAHLELTQ KKAEAASLAK SEFLATMSHE
IRTPMNAILG MTELLGETQL SIEQRGFLSV CRSAGENLLQ IINDILDISK VESGGLELQH
VPFNLRRIVY DAGEVIRFRS HEKGLHQLIF IDESVPEWLL GDPARIRQIL INFLGNAIKF
TEAGTIATVV STTAGKGSQV EIVFRVIDTG IGIPESKQSV VFDAFKQLDS STQRRYGGTG
LGLTISKKLA DLMGGQLGLK SQEGHGSTFT LSLRLSRSTG PSKSSAQPAP IFAGMHILIW
HTHPIKRMNI EETLIRYGAT LHHCSEVDPF LRCAQANHAA TPIDLLFIHF DHADVDVLSE
IKRLRAVSPW EKIPVLIYGR CHDRSLPAKM LQQGVNFLPE PVFPDVLLDE LCRITQKSQQ
PEVDSKPSRA SLRVLLVDDS EDNLLLASTF LKSTPHIVQT ATNGKQAVER FTQTSPRFDL
ILMDIQMPEM DGFQATAAIR AWEKAHKKPP CPIIALTAFA MSDDESKCLS AGFTGYVSKP
ISKARLLEAM EACTAAKAPT QAEGQVD
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