| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3394 |
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| Symbol | |
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| ID | 4484080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4230691 |
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| End bp | 4232373 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639724142 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_867286 |
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| Protein GI | 117926669 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCGG AAAACATAAC CAACATATCC GCACTGCGTA GCCGGGCAGA AGAGGTGTTG
AAAAGTGATA CACACGCTTT GGATCAATTT GAACGCACGG ATTTACAGAC GCTGATTCAT
GATCTGCGGG TGCATCAAAT TGAACTGGAG ATGCAAAATG ACGAACTGCG CATAACCCAG
GAGCGTTTGA TCCGGGTGCG TCAAGAGTCG GATCAACTGC GTGAATGTTT TTCCCGCCTG
TTTAACGAAG CCCCTACTGG ATATTTGGTT GTTGACCATT CCGGTATTGT GCAGATGGTC
AACGAGACCT TTTTAGACCT GCTCCAAGCT CAGGATACCC CCGTTATCGG CAAACCCTTT
CTTAACTGGA TCGATGCCAG GGACCGCTCA GAGTTTCTTG CTCGCTATAC CAGTTTTTTC
AACAAACCGA CCAATAAGAG CCTTTCACTA CGCTTGATTC CCCAACAAGG ACTCCCCTTT
TATGCCCAAT TGGAGGGCAA ACGCGCCGAT TGGGATAGCT CTTGTCTTGG CAGCAGCAAG
GTTAAGGGCA ACCATCTCTT GGTCGTTGTC AGTGACGTTA CCCCGCTGAT TGATAGTAAT
CTTGCTATGC AACGTGCCAA AGCGGAAGCT GAACAGGCCA ACCAGATTAA GGATAAATTT
ATCTCCTTAG TGGCGCATGA TCTGCGGGGA CCATTAAGTT CTATTGTCGG GCTGCTTGAA
TATTTGATGG AAGAGGCCGG ACATGTGCTC GAAAAAGAGC ATATGGAATT GATTCAGGTG
GCCCGCAATA GCGGTAATAG CTTGCTTAAT TTAACCGAGA AAATTCTTAA TATTAGCCGC
TTAAATACCG GGCTAATCAC TTTAAAACAA GAGTTTATTG ATGCTTATAT GTGTATTGAG
GAGTGCCTGC CCAAACTGGA GTATATGCGG CGCCAAAAGC GGCTACGAAT CATCAATAAT
GTCCCACCGG GTACACGTAT TTTCGCCGAC CCTGTGCTGT ATGGAGAGGT GATACAAAAT
CTGCTCTCCA ATGCCATCAA ATTCAGCCAT GCTGAGAGCG CCATCCGGTT TGAGGCTTGC
CCAACTAAAC CCGGCACCAT AGTGGTCAAA GATGAAGGGG TGGGTATCGC ACCCGACCTA
CAAACCCAGT TGTTTGATGC AGGTAGCAAA ACCAGCATGC CCGGCACCGA TGGGGAGAAG
GGGTCCGGCT TTGCTTTACC CTTTTGTGCC AATATTATTG AGAGCCATGG GGGGGATATT
ACCGTTTGGT CCGAGCTTGG CAAGGGTAGC CACTTTACCG TCACCCTACC CCACATTAGA
CCCAGAATTC TAATTGTTGA TGATGATCAG GACATTCGCA CGCTTATAAA AACATATTTA
AACATTCTCG AAGATTGTGA ATTCTTTGAG GCATGGGATG GTCAAACCGC CTACACCAAC
ATGGTGGAGC TGCGTCCCGA TCTTGTATTG TGTGATGTCT ATATGCCCCT TATGGATGGT
TTTCAGCTGC TCAAAAAGGT TCGTTCCACC ACAGATATTC AAAAAATTCC GATCATCATG
ATCACCAGTG ATCGTGCCCT AGAAACCCAA GAACGCCTAC TCCGTAAAGG CGCCTACGAT
GTGATCGTCA AACCCCTTAA CGGAGACGAG CTACTAACCC GTGTCCGACG TATCGTTTGG
TAA
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| Protein sequence | MNSENITNIS ALRSRAEEVL KSDTHALDQF ERTDLQTLIH DLRVHQIELE MQNDELRITQ
ERLIRVRQES DQLRECFSRL FNEAPTGYLV VDHSGIVQMV NETFLDLLQA QDTPVIGKPF
LNWIDARDRS EFLARYTSFF NKPTNKSLSL RLIPQQGLPF YAQLEGKRAD WDSSCLGSSK
VKGNHLLVVV SDVTPLIDSN LAMQRAKAEA EQANQIKDKF ISLVAHDLRG PLSSIVGLLE
YLMEEAGHVL EKEHMELIQV ARNSGNSLLN LTEKILNISR LNTGLITLKQ EFIDAYMCIE
ECLPKLEYMR RQKRLRIINN VPPGTRIFAD PVLYGEVIQN LLSNAIKFSH AESAIRFEAC
PTKPGTIVVK DEGVGIAPDL QTQLFDAGSK TSMPGTDGEK GSGFALPFCA NIIESHGGDI
TVWSELGKGS HFTVTLPHIR PRILIVDDDQ DIRTLIKTYL NILEDCEFFE AWDGQTAYTN
MVELRPDLVL CDVYMPLMDG FQLLKKVRST TDIQKIPIIM ITSDRALETQ ERLLRKGAYD
VIVKPLNGDE LLTRVRRIVW
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