Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3375 |
Symbol | |
ID | 4483311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4203470 |
End bp | 4204108 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639724123 |
Product | paraquat-inducible protein A |
Protein accession | YP_867267 |
Protein GI | 117926650 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0541727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCC GCTATGGTCA GCGCGCACCT CGTGCCATGG CACATCACCT ACAGCGTTGC GAGGCGTGTG GTTTGGTGGT GGCGGTGGCC CATGTGGGAC CATGCCCCCG TTGTTTGGGT AAGTTGCATG TGCGGCGTCC GCAGTCGATT ACCCGCACAT GGGCACTGCT GTTAACGGCG ACATTACTCT ATATTCCTTC TAACACCTTT CCCATCATGT CGGTTGTGAA GGCGGGGCAA TATAGTTCAG ACACCATTAT AAGTGGCGTT ATCTCACTTT ATACGGCGGG CATGTGGCCG TTAGCCCTGA TTGTGTTGGT TGCCAGTGTG TTCATACCCA TGCTCAAGTT GGGGGCGCTG ACCACGTTGT TGATATCGGT TCAGCGGGGC AGCCGGGTTG CGCCACGCAC ACGGCTGCGG CTTTACCGTT TGACGGCTTG GATTGGGCGT TGGTCGATGG TGGATATTTT TGTGATTACG ATTTTGACGG CGTTGGTCGA GCTTGGGGCG GTTGCGACGA TTACGCCAGC ACCGGGTGCC TTTTATTTTG GTATGGTGGT TGTGTTTACG CTGTTTGCGG CGGAGTCGTT TGATCCTAGG TTGATTTGGG ATGTTATGGA AGAGTCGCCG GAATCTTAG
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Protein sequence | MSSRYGQRAP RAMAHHLQRC EACGLVVAVA HVGPCPRCLG KLHVRRPQSI TRTWALLLTA TLLYIPSNTF PIMSVVKAGQ YSSDTIISGV ISLYTAGMWP LALIVLVASV FIPMLKLGAL TTLLISVQRG SRVAPRTRLR LYRLTAWIGR WSMVDIFVIT ILTALVELGA VATITPAPGA FYFGMVVVFT LFAAESFDPR LIWDVMEESP ES
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