Gene Mmc1_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3375 
Symbol 
ID4483311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4203470 
End bp4204108 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID639724123 
Productparaquat-inducible protein A 
Protein accessionYP_867267 
Protein GI117926650 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0541727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC GCTATGGTCA GCGCGCACCT CGTGCCATGG CACATCACCT ACAGCGTTGC 
GAGGCGTGTG GTTTGGTGGT GGCGGTGGCC CATGTGGGAC CATGCCCCCG TTGTTTGGGT
AAGTTGCATG TGCGGCGTCC GCAGTCGATT ACCCGCACAT GGGCACTGCT GTTAACGGCG
ACATTACTCT ATATTCCTTC TAACACCTTT CCCATCATGT CGGTTGTGAA GGCGGGGCAA
TATAGTTCAG ACACCATTAT AAGTGGCGTT ATCTCACTTT ATACGGCGGG CATGTGGCCG
TTAGCCCTGA TTGTGTTGGT TGCCAGTGTG TTCATACCCA TGCTCAAGTT GGGGGCGCTG
ACCACGTTGT TGATATCGGT TCAGCGGGGC AGCCGGGTTG CGCCACGCAC ACGGCTGCGG
CTTTACCGTT TGACGGCTTG GATTGGGCGT TGGTCGATGG TGGATATTTT TGTGATTACG
ATTTTGACGG CGTTGGTCGA GCTTGGGGCG GTTGCGACGA TTACGCCAGC ACCGGGTGCC
TTTTATTTTG GTATGGTGGT TGTGTTTACG CTGTTTGCGG CGGAGTCGTT TGATCCTAGG
TTGATTTGGG ATGTTATGGA AGAGTCGCCG GAATCTTAG
 
Protein sequence
MSSRYGQRAP RAMAHHLQRC EACGLVVAVA HVGPCPRCLG KLHVRRPQSI TRTWALLLTA 
TLLYIPSNTF PIMSVVKAGQ YSSDTIISGV ISLYTAGMWP LALIVLVASV FIPMLKLGAL
TTLLISVQRG SRVAPRTRLR LYRLTAWIGR WSMVDIFVIT ILTALVELGA VATITPAPGA
FYFGMVVVFT LFAAESFDPR LIWDVMEESP ES