Gene Mmc1_3374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3374 
Symbol 
ID4483310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4202811 
End bp4203473 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content59% 
IMG OID639724122 
Productparaquat-inducible protein A 
Protein accessionYP_867266 
Protein GI117926649 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0510554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGGT ATTGGATTGA CCTTTACCAC CGTTGGGAGC CCATGCAAAC ACCAGTTACC 
ACCGATACCA TGGCCTGTCC ATGGTGTGAC ACCTTGCATA AAGTACCCAC CCCTTTACCG
GAGGGGCAGT TTCACTGTGT GCGCTGTCAC AGTACCCTAT TTCATTATAA ACAGGGGGGT
GCGCGGCGGG CTTTGGCGTG GGCGCTGAGT GGCTTAATTT TGTTGATTCC TGCCATTACC
CTACCTTTCA TGGCGTTGGA GGCGGGTGGG CAATGGCAGG CAGGCTCTAT TTTGGATGGG
GTCATTGCAC TTTGGGAGAG TGGCAGCCCG GTGGTGGGGG CTTTGGTATT ATTGACGGGC
ATGCTGGCGC CTACGCTGCA TATTGCCGGT TTGGCGTTTG TGGCGTGGTT GATGCGTCGT
GACACACCAC CGCCCCATTG GGCAGCCCCA CTCTACCGGC AGGTGGGGGT GATCCGTCAC
TGGAGCATGC TTGAGGTTTA TATGCTGGGC TTAATTGTGG CGGCCACCAA ACTGGGGGAT
CTGGCCCATG TAAGCATGGA GCAGGGTTTA TGGGCCTTTG TGGGTTTGGT GGTGGCCACC
AGCCGGGCGG GTGCGGCGTT GGAGCCTGCA CTGGCGTGGC GCCGCTGGCA GGTGCCCCGA
TGA
 
Protein sequence
MVGYWIDLYH RWEPMQTPVT TDTMACPWCD TLHKVPTPLP EGQFHCVRCH STLFHYKQGG 
ARRALAWALS GLILLIPAIT LPFMALEAGG QWQAGSILDG VIALWESGSP VVGALVLLTG
MLAPTLHIAG LAFVAWLMRR DTPPPHWAAP LYRQVGVIRH WSMLEVYMLG LIVAATKLGD
LAHVSMEQGL WAFVGLVVAT SRAGAALEPA LAWRRWQVPR