| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3371 |
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| Symbol | |
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| ID | 4483307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4200823 |
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| End bp | 4201455 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724119 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_867263 |
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| Protein GI | 117926646 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0253707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTAC CCCCTCCCTT TGAATTTATG CCGAATGATC CAGATGCGGC GCATCTTAAA
CAGGCCCTAA ACGGCCATCC CGAGGCTTAT GCCTTGGTGG TGCGACGGCT ACAGGTGCGG
GTATACCATT TTGTGTTGCG TCACATCCAT TCACCGGAAG ACGCCGAAGA TTTAACGCAG
GAAACTTTTT TAGAGGCGTA TAGAAATCTT TCACGTTTTC AAGGTAATTC GCTTTTTTCA
ACATGGTTAT TGGGCATTGC CCACAATATG GCGCGCAACT TTAGGGGCCG TGCGCCCCAC
TACAGATATG ACATAACCGA TGATTCGGTT TTGGAATACA CTTCGGATGA TCGGCCCACG
CCCCATGATT ATGCGGACGA GGCCGACCGT ATGAAATTAC TCAAACGGGC TATGGAGCAG
CTACCGGAAG AGCAGCGCGA AGCCCTGACG TTGATTTCAT TGGAAGAGTT GAGTTATGAA
GAGGCCGCTG TGGTGGCGGA TATCTCTTTA TCGGCGTTAA AAACACGGGT ATTTCGTGCG
CGCAAACATT TGCGAGAACT TCTGCACAAG GGTGGCGTGT TGGATCAGTT TGAGCCACAA
GAGCGCGGCG AGCGCACCGG GGGGCGGTTG TAA
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| Protein sequence | MILPPPFEFM PNDPDAAHLK QALNGHPEAY ALVVRRLQVR VYHFVLRHIH SPEDAEDLTQ
ETFLEAYRNL SRFQGNSLFS TWLLGIAHNM ARNFRGRAPH YRYDITDDSV LEYTSDDRPT
PHDYADEADR MKLLKRAMEQ LPEEQREALT LISLEELSYE EAAVVADISL SALKTRVFRA
RKHLRELLHK GGVLDQFEPQ ERGERTGGRL
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