| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3360 |
|---|
| Symbol | |
|---|
| ID | 4482802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4185074 |
|---|
| End bp | 4187044 |
|---|
| Gene Length | 1971 bp |
|---|
| Protein Length | 656 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639724108 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_867252 |
|---|
| Protein GI | 117926635 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase
[COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0976665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAACC GCGCTCTACC CGAAGGCTAT ACCCTAGGCA ATTACCAGAT CCATGCGGAG
CTGGCGCGCA GCAGCTTTGC CATCGTCTAT CTGGCCTTTC ATGCCAGTGG TCCGGTGGTG
GTTAAAGAGT TCATGCCCCA GCTGCCGGTG CATCGGGATA GCCTAGGGGG GATTTCAGTC
CGTGCCGACA ATCAAGCCGC CTATGCGGCT CAACGTCAGC GTTTTCGCTA TGAAACACAG
CTGTTAGCCC ACCTTAAACA CCCCTCTATT CCCCCCTTGT TGGACCATTT TGATGCCCTT
GGCAGCAGTT ATATGGTGTT GCGTTATGTC CAAGGGGAGG ATTTAGAATC CCTCGCAAAA
CGCCGCTTTT TAAACGAGTG GGAAATCCTC CAACTGCTCA GCCCCATTTG CCAAGCCCTT
AGCCAGTTGC ATGAGTTGGG ACAGAGCCAT CTTAATCTAC GCCCCAGCAC CCTGTTAATC
CAACCCGATG GCCAGCCCAT GCTTACCAAT TTTGGCTCAG CCTGGTCCAT GGGCAGTCTG
CAACGGGGCG AAGCCAATTT TCATTTTGAC CGGGGTTACA GCGCATTAGA AATGCACACC
GGAGAGGGCG TCGGCCCAGC CAGCGACCTC TACACCCTAG GCGCTACCCT GCATCGTCTG
CTGGTGGGCG AACCCCCGAT CAACAGTGTG GTGCGCCACC TTTACCGTAA TGATTATGGT
GAAGATCCCT ACCGCGCTTT GCGCCGTCGC TATCTGGATC TCTTTAGCCC CGCCCTACTC
GAAGCGGTGG ATTGTGCTTT AACCCTAGAT GTGGCCCAGC GTCCCGCAGA TATTCAACAA
TGGCTGGAAC GTTTTGATCT TCACCAGCCC GCCCCTGAGT TACCACGCCC CCACCCTCAA
CTCTTGGCGG GGGATCACTA CTACCGCATG AAACATCGGG ACGAAGCGCA ACTGGCCTAT
ATGGAAGCGG CCCAGGACGG GGCTCATGCC GCCCATCGGG CGACGGCCCA ACTGCGTTTA
CGAAGCAGCA CCCAAGAGGC CCTGCAAGCG GCCCGTGATC ACCTGTTTGC GGGCTCAGCG
GCGGGGGATC TGGAGGCCAC GGTGCAGCTG GCTAAACTGC TCAAGGAGCA CCCTCAATTG
GGCAGCCGTG GCATGACCGC CGCGACCTTT TACAAACAGG CTGCCCAGCA GGGGCACAGC
AAAGCCATGT ACCGCTATGC CATGGAAAAG TTTACCCAGG CCCTTAGCGA TCAGATCGGC
AGCCCGGCCT TGGATCAGGC CATCAACTGG CTGTGGCATG CGGCCCTGGC GGGTTTTGAT
GAAGCCCAAT GGGCGTTGGC TCAGGATCTG GATGCCGGAC TTATCCCCTG TAACGAGAAT
GAAGCACACC ACTGGCTCAC CTATGCCGCC CATCAAGGTT GGATTGACGC CCAACTGCGG
TTGGCGAAAA AGGCCTTACA GGGTACGCCA CCCCACATTC CACCCGATCC AAAAGGGGCC
TGTTACTGGT ACCAAGCCGC CGCAGAGAGC GGAGAGGTTG AGGCACAATT GGCCCTGGCC
GAGCTGCTCA TGCGGGGGCG CGGCACCCCC CGTAACACCG CAGAGGCCCT CTACTGGCGA
CAGCAGGCCG CTCTGCAAGG CAGTCGACAG GCCCACTTTT TACTGGCCAT GCAGTACTAC
AGTGGCAACG GCGTGCCAAA AAATCTTGCG ACGGCCCGGC GTGGTTTTGA ATCCTTGGCC
CTGGGGGGGC ATGGCCCCGC GCAAAAGATG CTGGCACAAA TGCTCATGCG GGGGGAAGGG
GTGATGCGCA ATCGACTACA GGCCCGCCAT TGGTATCGTG AAGCGGCCAA AGCGGGGGTG
CATGGCGCGC AAGAGGCGCT TCAGCGCATG CAGCGCCCAA CGGCACCACC GGGTCCCAAA
CAGAGCAAAC CCCGTGGTCA ACGGGTCGCC CCCACCCCCA AGACCGAGTA G
|
|---|
| Protein sequence | MHNRALPEGY TLGNYQIHAE LARSSFAIVY LAFHASGPVV VKEFMPQLPV HRDSLGGISV
RADNQAAYAA QRQRFRYETQ LLAHLKHPSI PPLLDHFDAL GSSYMVLRYV QGEDLESLAK
RRFLNEWEIL QLLSPICQAL SQLHELGQSH LNLRPSTLLI QPDGQPMLTN FGSAWSMGSL
QRGEANFHFD RGYSALEMHT GEGVGPASDL YTLGATLHRL LVGEPPINSV VRHLYRNDYG
EDPYRALRRR YLDLFSPALL EAVDCALTLD VAQRPADIQQ WLERFDLHQP APELPRPHPQ
LLAGDHYYRM KHRDEAQLAY MEAAQDGAHA AHRATAQLRL RSSTQEALQA ARDHLFAGSA
AGDLEATVQL AKLLKEHPQL GSRGMTAATF YKQAAQQGHS KAMYRYAMEK FTQALSDQIG
SPALDQAINW LWHAALAGFD EAQWALAQDL DAGLIPCNEN EAHHWLTYAA HQGWIDAQLR
LAKKALQGTP PHIPPDPKGA CYWYQAAAES GEVEAQLALA ELLMRGRGTP RNTAEALYWR
QQAALQGSRQ AHFLLAMQYY SGNGVPKNLA TARRGFESLA LGGHGPAQKM LAQMLMRGEG
VMRNRLQARH WYREAAKAGV HGAQEALQRM QRPTAPPGPK QSKPRGQRVA PTPKTE
|
|---|
| |