| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3351 |
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| Symbol | rpmA |
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| ID | 4481627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4174100 |
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| End bp | 4174360 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639724098 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_867243 |
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| Protein GI | 117926626 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00061388 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACATA AGAAAGCTGG CGGTAGTTCC CGCAACGGGC GTGATTCAGA AGGTCGTCGC
TTGGGCGTTA AGAAGTACGG TGGCGAAAAC GTGATTCCTG GTAACATTCT GGTGCGTCAG
CGCGGCACCA AAATGTGGCC TGGCGTTGGT GTGGGTATGG GTAAAGACCA CACCTTGTTT
GCGCTGGAGG AGGGTCGAGT GGCCTTCACC ATGCGGCGCA ACCGTCAATA TGTAAATGTG
GAAGTTGCGG CGGCTCAGTA A
|
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| Protein sequence | MAHKKAGGSS RNGRDSEGRR LGVKKYGGEN VIPGNILVRQ RGTKMWPGVG VGMGKDHTLF
ALEEGRVAFT MRRNRQYVNV EVAAAQ
|
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