| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3350 |
|---|
| Symbol | |
|---|
| ID | 4481626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 4172593 |
|---|
| End bp | 4173756 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639724097 |
|---|
| Product | GTP1/OBG domain-containing protein |
|---|
| Protein accession | YP_867242 |
|---|
| Protein GI | 117926625 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0536] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00715072 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTC TAGACGAAGC GAAAATCTAC CTAAAATCCG GCGACGGCGG TGGCGGCTGC
ATCTCGTTTC GGCGGGAAAA ATATATCCCT TTTGGTGGGC CGGATGGCGG CGATGGGGGG
CGTGGTGGCG ATGTTATTTT TCAAGCCGAT GGCCACCTGA ATACGCTTAT TGATTTTCGC
TACAAGCAGC ATTTTAAGGC CAAGCGGGGC ACCCATGGCA TGGGCTCACA GTGTACCGGT
GCCTCGGCGG AGGCGCTGAT CATCAAGGTG CCGGTGGGGA CCATTATCCG GGATGATGCC
GACGGCACCA TATTGGTGGA TATGGTGGAG GATGGTCAGC AATTTCTCGC CTGTAAGGGG
GGGGATGGTG GCCGGGGCAA CATGCATTTT AAGAGTTCCA CCAACCAAGC CCCGCGTCGG
GCTGATCCGG GTTTTCCGGG TGAGGAGATG TGGGTACGGT TGGAGATGAA ATTGCTGGCC
GATGTGGGGT TGGTGGGTAT GCCCAATGCG GGCAAGAGCA CGCTTATCTC CAAGGTCTCT
GCGGCGAAAC CCAAGATTGC GGACTATCCT TTTACCACCT TGCAGCCCAA TTTGGGGGTG
GTACGGGTGG AGATGGACCA CAGTTTTGTG ATGGCGGATA TTCCGGGCTT GATTAAGGGT
GCCCATGAGG GGCACGGGCT GGGTATGTTT TTTTTAAAGC ATATTGAGCG GTGTGCGGTG
TTGTTGCATT TGGTGGAGAT TGATTCGCTG GAGGATGATG ATCCGGTGAG CCGTTTTCAG
ACCATTGAGG CGGAGTTGGC GGGTTATTCG GAGCAGTTGG CGCAGAAGCC GCGTATTTTG
GTGCTTTCCA AGGCGGATTT GTTGGGGGAA GAGGATCGCC AGGTGGTGCT TTCGTGGTTT
AAGGAGCGGT TGGGGGAGGC GATGCCACCG GTCTTTATCC TTTCGTCGGC CACGGGAGAG
GGTATTGAGG CGTTGGTTTA TCATGTTGGT GGTATGGTTA AACAGTGGCG GTTAAAGCAG
GGCAAGGTGG GTCATGCCTT GGAGGATGCT CCGACCCGTG CGGGCAGCAA GGCGCTACGG
GATGAGCATG CTCCGTCGTG GCAAGATGAC GATGATGACG ACGATGATGA TGATGGTGTG
GAAGTTATTT GGGTCCGGGA GTGA
|
|---|
| Protein sequence | MKFLDEAKIY LKSGDGGGGC ISFRREKYIP FGGPDGGDGG RGGDVIFQAD GHLNTLIDFR
YKQHFKAKRG THGMGSQCTG ASAEALIIKV PVGTIIRDDA DGTILVDMVE DGQQFLACKG
GDGGRGNMHF KSSTNQAPRR ADPGFPGEEM WVRLEMKLLA DVGLVGMPNA GKSTLISKVS
AAKPKIADYP FTTLQPNLGV VRVEMDHSFV MADIPGLIKG AHEGHGLGMF FLKHIERCAV
LLHLVEIDSL EDDDPVSRFQ TIEAELAGYS EQLAQKPRIL VLSKADLLGE EDRQVVLSWF
KERLGEAMPP VFILSSATGE GIEALVYHVG GMVKQWRLKQ GKVGHALEDA PTRAGSKALR
DEHAPSWQDD DDDDDDDDGV EVIWVRE
|
|---|
| |