| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3344 |
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| Symbol | |
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| ID | 4481620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4163597 |
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| End bp | 4167769 |
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| Gene Length | 4173 bp |
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| Protein Length | 1390 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639724091 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_867236 |
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| Protein GI | 117926619 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGA GCGGTAAAAT TATCACCCTG GTCTGTGTGA TTGCCATTTT AGCGGCGGGC
AGTGTGGGTT ATGCCACCAT GGAGCGGTTG CAAAAGGAGC TGACGCTGCA TGCCCAACAA
CAGGTGCGCC ACACCACGCA GCAGGTAAGC CACAAGCTGG AACAAGGCAT CGCCCTGTTG
ATGGCCGATG TGCGCACCCT AGCGGCGGAT CCCGCCCTGT TGGATCTGGC GGAGCTCGCC
CGTGGCGTCC CCCATGAGCA TGGCGATGTC CACGCGCACA AACAGCGCAT GGCACAGATT
TTTACCAATC TTTTACAGCA ACGGGCTGAC TATCAGCAGA TCCGCCTTAT TGGTTTGGAT
GAGGATGGGC GGGAGCTTAT CCGCATCAAG CGCCAGCCTG ACAACACCCT CACCCAGGTT
GCCCCAGCGG ACCTGCAAAC CCAAGGACAG CGCAGCTATT TTAAGCGCAC CATTATTCTG
CCAAAAAATC AGGTTTATCT CTCTGAGATT AATTTAAGCC GGGAAAATCA GGTTATTGTA
AGCCCACACA TGCCGGTTAT TCGTGCCAGC ATGCCGCTTT TTGACCATTT GGGGGAAACC
TTTGGTTTGC TGGTCATCAA TCTGGATCTC AGCCGTCTGC TGGCGGATTT GCAGCACCAG
ACCCCAGGTC AGAGCATGCA TCTGTTCAAC CATCACGGCT ATCTACTGGC AAGCAGCCCA
CCGCAGGCCG AGTTGCAGAA CTTTGGCTTT GAGTTTAACC AGCCGCCGTT GATGCTCACC
CTCTACCCGG TTTTGGCCCA GCAATTAAAC CATAGCGCTG AGAGCGCCTT TACTTTGGTG
GCACAGGATG CGCCATCCGG CACCCATGAG CTGTTGGGGG TGCAGACGCT CTACCATAAC
CCCAACCGCC CCGACCAACG GTTGGTGATC ACGGTAAGCA TGCCCTACCA GAAAATTTTC
ACCACCCTTT ACAGCTCCAG GGATGAGTCT CTGCTTATCG GTGGCGGCAT GCTGCTTATG
GCCTTGCTGC TGGCGGTGCT GTTGACCCGC TCTTTGACCC ACCCCTTGCG GGCGATGATT
CGCGCGGTCG AGGATACCGC CCATGACCAG GGCCGCCACG CGCTACCTGT AGGGGTTGGG
GGGGAAATGG GGATTCTAGC CAAGGCTTTT GCGCAGATGT TGCAGCGCAC CGCCGAGCAG
AACGCCGCTC AAGCCGATCA CCGTGCTAAT CAACTCTTAG AAGCCACCGA CGTTGGGGTG
TTTGGTATTG ATGACCAGGG TTTGGTCTCT TTTATCAATC CGGCAGCCGA GCGCATGTTG
GGTTACAGTC GTGAAGCGCT GTTGGGTAAA AATATCCACA GCATGGTGCA CCACGCCTAT
GCCGATGGCA CACCCTATCC GGAACATGCA TGCCGCATGT CGGCGGCCCT ACGGGAGCAA
CGGGAGTACC ACGTGACCGA TGAGGTGCTG TGGAAACAGG ATGGCAGCCC TTTTTATGTC
ACCTACAGCA GCATTCCCCT CTGGCAAGGG GATCAGCGCA GTGGTGCGGT CATCACCTTT
TGGGACACCA CGGAACAGCG CCAGGATGAG CAGAAGCTAA TCGCTGCCCA ACAAGAGGCG
GAGTTGATCG CCGCCGAAGA GCGCGCCCTA GAGGCTCTCT TTAAGTTGAC CCTGCAAGAG
AGCGCCACCA CCCACTATCT CGAAGAGGTG TTGGAGGCGC TGATTCACTC GGTACCCTGG
CTCAAGCTTA AACCGGTGGG GGGGCTCTTC CTCACCGATG AGAGCGCCCC CCAACCCCAG
CTCAAGTTGG TGGTCAACCA CAATCTTGAC CCAGAGTTAA AGCAGCGCTG CGCCAAAGTC
CCTTTTGGCA CCTGTTTGTG TGGTCTGGCG GCCCAAAGTG GCACCCTACA GTTTGCCAGC
TGCATGGATC ACCGCCACGT CATTACCTTT GAGGGGATTA CCGCCCATGG GCACTACAAC
GTGCCCATTA TGGATGGGGC ACAGGTACTG GGCGTGATGG TGCTTTATCT CGCCCACGGC
CACGAGCAGA AGGAGCGGGA GACCGCCTTT CTGGCGCGAG CTGGGCATAT TATCAGCATG
GGATTAATGC GCCGCCGTGC CGCCAAGGAG TTAAGCTGCG CCAAGCAACG CGCCGAGCGG
GCCAACCATG CCAAGTCTGA TTTTTTGGCG ACCATGAGCC ACGAAATTCG CAATCCTATG
AATGCCATTA TCGCCCTTAG CCACCTTGCC CTGGAACAGA GCCACGACCA GCGCCAGAGG
GACTATCTGA GCAAAATCCA CACAGCGGGC CAATCGTTGT TACGTATCAT CAATGACATC
TTGGATTTTT CCAAAATTGA GGCGGGCAAG CTGGAGATTG AACAGACCGA TTTCCAATTG
GATGATGTGT TGAGCAACCT TGCCACCCTG ACCGCGGTTA AGGCCCAAGA GAAACAGATT
GAGCTTATTT TCGACAAAGC CCCGGCGCTA CCCCACGCCT TGCGTGGGGA CCCTTTACGC
CTGAGTCAAA TTTTGCTCAA TGTGGTGGGC AACGCCATTA AGTTTACCGA GCAGGGCGAG
GTGGAGATGA GCATTACCCG CCACACCCAA CGGGGGGAGC TGCTGGAGCT CTGCTTTACC
GTGCGCGATA CCGGTATTGG GATGAATGAA GCGCAGATAG CGGAACTGTT TCGCCCTTAT
CAGCAGGCCG AATCTTCGAC CTCTCGCCGT TTTGGGGGCA GTGGTTTAGG GCTCTCCATC
AGCCACCAGT TGGTCACGCT CATGAACGGG ACCATTCAGG TGAGCTCAAC ACCCGGGGTT
GGCAGCCAAT TTGTTATTAC CTTGCCCTTT GCCGTTTTGC CGGATCGGCC AGAAAGTCTC
GTCATACCCA AGCTGTTGAC GGGGCAGGTG GTGGTGGCCA GCGCCAACCA GCGCATGTGT
GACGTGGTGG CAGAAAACCT TGGCCGCTTT GGTCTGACCT GTGCCAGTGT CGGTGCCATG
AGCACTCTGC ATCAGTGGTT AGAGAATAAC CCGCTGCCCC GCTTTATGGT GTTGGATGCG
GATATGCTGC CGGTCTCCAT GGCACAAGAT CTGGAGCTGC TGCTCAACCC CATGCTTCAC
CGTTTTGTCG AGGGGGGGGT GCTGATGTTA CATGGCTACC AGACTCAGCA AGCGGTTATG
GATCTGGCCG CTAAGGATGC ACGGGTGGGG GCGGTACAGA AGCCGGTCAC CTCTTCCAGC
CTCTATGATG GTGCAGTACA GCTCCTGGGG GTAGGCTCCC TTAGCGATGC CCAACACGCC
CCGGTACAAT CCAATGCCTC GCCCACCACG TGGCCCCAAC TGACTGGCCG TCATATGCTG
GTGGCAGAAG ATAATGCCAT CAACCAGCAA ATTATCCAGG AGCTCTTGAG TAAAGTCGGG
GTAAACGTGA CGCTGGTCAA CAACGGGTTC GAGGCGGTGG AAAAGGCCAA CCCCCTGCAT
CATGACGCCA TTCTCATGGA TCTGCACATG CCCCTTATGG ATGGCTTTGA GGCCACCACG
CAAATCCGCC AACGGTTTGG CAACACACTG CCCATCTTTG CCATGACCGC CAGCTCAACC
CCAGAGGATC AAAAACAGGT GCAGCAGAGT GGTATGAATG GTCACCTGAC CAAGCCCATT
GATCCAGTTC TTTTGTACAC CAATCTAAGC CAATGGCTTG GCGAGCAACC ACCTAAGCCG
CCATCGGTTT CATCCCCTCA ACCCGCTCAA CCACAACCGG CGGACAGCCT GCAAAGCGTG
CCGGGGCAAC CGGGCCAGCG CTCTCCTGCT GGTCCCCCCA ATATACCGGG CATCAATTAT
ACGCTAGGGC TGCAACAACT GGGTGGGGAT GCAGAGCTCT ATCACCAAAT ACTTCTCGCC
TTTGAGCAAG ATCAGCGGGA GACCTCTGCT AAACTGATTC AGCTACTGGA AGCGGGTGAC
TTGGCCGCCT TGGAACCCTT GGTGCATACG CTCAAGGGAT TGTTGGGCAG TGTTGGGGCG
GAGCGCTTAC GCGCCAGGGT CATCGCCCTG GAGACCTCGC TGAAGATGGC TCAACCCAAA
GAGAATATCG CTGCACTTAT TCAAACGATG CAGGCGGAGT TGGCCCCCAT GCTGGCGGCC
ATTGCCCAGC TACACATTAA AGCGGGGCGT TAA
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| Protein sequence | MSMSGKIITL VCVIAILAAG SVGYATMERL QKELTLHAQQ QVRHTTQQVS HKLEQGIALL
MADVRTLAAD PALLDLAELA RGVPHEHGDV HAHKQRMAQI FTNLLQQRAD YQQIRLIGLD
EDGRELIRIK RQPDNTLTQV APADLQTQGQ RSYFKRTIIL PKNQVYLSEI NLSRENQVIV
SPHMPVIRAS MPLFDHLGET FGLLVINLDL SRLLADLQHQ TPGQSMHLFN HHGYLLASSP
PQAELQNFGF EFNQPPLMLT LYPVLAQQLN HSAESAFTLV AQDAPSGTHE LLGVQTLYHN
PNRPDQRLVI TVSMPYQKIF TTLYSSRDES LLIGGGMLLM ALLLAVLLTR SLTHPLRAMI
RAVEDTAHDQ GRHALPVGVG GEMGILAKAF AQMLQRTAEQ NAAQADHRAN QLLEATDVGV
FGIDDQGLVS FINPAAERML GYSREALLGK NIHSMVHHAY ADGTPYPEHA CRMSAALREQ
REYHVTDEVL WKQDGSPFYV TYSSIPLWQG DQRSGAVITF WDTTEQRQDE QKLIAAQQEA
ELIAAEERAL EALFKLTLQE SATTHYLEEV LEALIHSVPW LKLKPVGGLF LTDESAPQPQ
LKLVVNHNLD PELKQRCAKV PFGTCLCGLA AQSGTLQFAS CMDHRHVITF EGITAHGHYN
VPIMDGAQVL GVMVLYLAHG HEQKERETAF LARAGHIISM GLMRRRAAKE LSCAKQRAER
ANHAKSDFLA TMSHEIRNPM NAIIALSHLA LEQSHDQRQR DYLSKIHTAG QSLLRIINDI
LDFSKIEAGK LEIEQTDFQL DDVLSNLATL TAVKAQEKQI ELIFDKAPAL PHALRGDPLR
LSQILLNVVG NAIKFTEQGE VEMSITRHTQ RGELLELCFT VRDTGIGMNE AQIAELFRPY
QQAESSTSRR FGGSGLGLSI SHQLVTLMNG TIQVSSTPGV GSQFVITLPF AVLPDRPESL
VIPKLLTGQV VVASANQRMC DVVAENLGRF GLTCASVGAM STLHQWLENN PLPRFMVLDA
DMLPVSMAQD LELLLNPMLH RFVEGGVLML HGYQTQQAVM DLAAKDARVG AVQKPVTSSS
LYDGAVQLLG VGSLSDAQHA PVQSNASPTT WPQLTGRHML VAEDNAINQQ IIQELLSKVG
VNVTLVNNGF EAVEKANPLH HDAILMDLHM PLMDGFEATT QIRQRFGNTL PIFAMTASST
PEDQKQVQQS GMNGHLTKPI DPVLLYTNLS QWLGEQPPKP PSVSSPQPAQ PQPADSLQSV
PGQPGQRSPA GPPNIPGINY TLGLQQLGGD AELYHQILLA FEQDQRETSA KLIQLLEAGD
LAALEPLVHT LKGLLGSVGA ERLRARVIAL ETSLKMAQPK ENIAALIQTM QAELAPMLAA
IAQLHIKAGR
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