| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3341 |
|---|
| Symbol | |
|---|
| ID | 4481617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4159545 |
|---|
| End bp | 4159967 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639724088 |
|---|
| Product | CoA-binding domain-containing protein |
|---|
| Protein accession | YP_867233 |
|---|
| Protein GI | 117926616 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1832] Predicted CoA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.125699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTTA TGAACGATGA CCAGATGGTT GAGATGTTAA AGGTCAGCAA AACCATTGCT
GTGGTTGGCC TAAGCCCCAA ACCCGACCGG GCTTCTAACA GGGTTGCGGC CTACATGCAG
CGCCAGGGCT ATACCATCAT TCCTGTGCAT CCTGGGGTGG ATCAAGTCCT GGGTGAAAAG
GCCTATGCCA CCTTGGAGGA TATTCCCAGC CACATCCAAG TGGATATTGT GGATGTTTTT
CGCCGTGCCG AACAGACCCC CGAGGTGTGC CAAGCTGCGG TTAACATTGG GGCCAAATAT
GTATGGATTC AGCTTGGCAT TGCCAATGCC GATTCCATGG CGATCTGTGC CGCAGCGGGT
ATACCCGCCA CGCAGGATCT CTGCTTAAAG ATTGAACATG CCCGTTTGCA ACACCAACTT
TAA
|
|---|
| Protein sequence | MSLMNDDQMV EMLKVSKTIA VVGLSPKPDR ASNRVAAYMQ RQGYTIIPVH PGVDQVLGEK
AYATLEDIPS HIQVDIVDVF RRAEQTPEVC QAAVNIGAKY VWIQLGIANA DSMAICAAAG
IPATQDLCLK IEHARLQHQL
|
|---|
| |