| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3339 |
|---|
| Symbol | |
|---|
| ID | 4481615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 4157175 |
|---|
| End bp | 4158155 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639724086 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_867231 |
|---|
| Protein GI | 117926614 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGCG ATCATAATCG GGATATGTTG GCACGGGCAC GCCAGACGCT AGAATTAGAG
GCTGAGGCCA TTTTAGCCAT GCGCGAGCGG CTGAATGGCG ATTTTGTTCA GGCTGTGCAG
CAGATTTTGG CCTGTACGGG GCGGGTGGTG GTGACCGGCA TGGGTAAATC GGGCATAATC
GGTCATAAGA TTGCGGCAAC CCTCTCCTCC ACCGGTACCC CCGCCCTCTA TCTGCATCCA
GGGGAGGGGA TACATGGGGA TCTGGGTATG CTTACCGCCC AGGATTGTGT CATTGCCCTC
TCCAACAGTG GTGAAACCGC CGAAGTGTTG GCGCTGTTGC CGGTTATTAA GCGGCTAGGT
ACCCCGTTGA TTGCCATCCT GGGGCGCATG GCCTCGACTT TGGCCCGGCA GAGCGATGTG
GCCTTGGATG CCTCGGTGGC GCGGGAGGCT TGCCCCTTGA ACTTGGCCCC TACCAGCTCC
ACCACGGCGG CCCTGGCGCT GGGCGATGCC TTGGCGGTGG CGCTGTTGGA AGCACGGGGT
TTTAGCGAGG ATCAATTTGC GCTGTTTCAC CCCGGCGGTG CATTGGGGCG TAAATTGCTG
CTCAAGGTAG AGGATCTCAT GCATCATGGG GCGGCACTGC CCCAGGTGGC GCGGCACACC
CTGGTTAAGG ATGCCCTGTG GGAGATGACC GCCAAGCGAC TGGGATTGAC GGCGGTGCTG
GAAGAGGATG GGCGCCTAGC CGGGATTATT ACCGATGGCG ATTTGCGGCG ACAGTTGGAG
GATCATCCGG GGGATCTGCT CAACCTGCGG GCCGAGCAGA TTATGACGGT CAATCCCAAA
GCGATTCAAC CCGATGCGTT GGCGGCCCAA GCGGTGCATG ATATGGAGAC CCGCGCCATT
ACCGCTCTGT TGGTGGTGGA CGCCCAGCAG TTGGTCGGGG TAATTCATCT GCACGATCTG
CTACGGGCTG GGGTGGTATG A
|
|---|
| Protein sequence | MESDHNRDML ARARQTLELE AEAILAMRER LNGDFVQAVQ QILACTGRVV VTGMGKSGII
GHKIAATLSS TGTPALYLHP GEGIHGDLGM LTAQDCVIAL SNSGETAEVL ALLPVIKRLG
TPLIAILGRM ASTLARQSDV ALDASVAREA CPLNLAPTSS TTAALALGDA LAVALLEARG
FSEDQFALFH PGGALGRKLL LKVEDLMHHG AALPQVARHT LVKDALWEMT AKRLGLTAVL
EEDGRLAGII TDGDLRRQLE DHPGDLLNLR AEQIMTVNPK AIQPDALAAQ AVHDMETRAI
TALLVVDAQQ LVGVIHLHDL LRAGVV
|
|---|
| |